RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
PRKCH-220ENST00000556164 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
PRKCH-220ENST00000556164 TRBV30A0A0K0K1B3 111 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 NUPR1O60356 82 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 CRYGAP11844 174 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 C2orf82Q6UX34 121 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 ANKRD29Q8N6D5 301 aa3.41□□□□□ -1.86
PRKCH-220ENST00000556164 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 HERVK_113P63121 156 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.87
PRKCH-220ENST00000556164 MRPL51Q4U2R6 128 aaKnown RBP3.4□□□□□ -1.87
PRKCH-220ENST00000556164 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 SMIM7Q9BQ49 75 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 MIEN1Q9BRT3 115 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
PRKCH-220ENST00000556164 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 CFC1BP0CG36 223 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 CFC1P0CG37 223 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 CKS2P33552 79 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 RPL28P46779 137 aaKnown RBP3.39□□□□□ -1.87
PRKCH-220ENST00000556164 UBE2AP49459 152 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 FAM104BQ5XKR9 115 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 Q6Q795 121 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 C20orf78Q9BR46 151 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 SMIM2Q9BVW6 85 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 IMUPQ9GZP8 106 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 XAGE1AQ9HD64 81 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 OSTCQ9NRP0 149 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 C22orf24Q9Y442 160 aa3.39□□□□□ -1.87
PRKCH-220ENST00000556164 ZNF727A8MUV8 499 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 BPY2O14599 106 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 BCE1O60756 84 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
PRKCH-220ENST00000556164 PEA15Q15121 130 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 TPRXLQ17RH7 258 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 MEIG1Q5JSS6 88 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 LYRM7Q5U5X0 104 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 HRCT1Q6UXD1 115 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 ORMDL3Q8N138 153 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 TOMM7Q9P0U1 55 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 ZNF706Q9Y5V0 76 aaPredicted RBP3.38□□□□□ -1.87
PRKCH-220ENST00000556164 V9GYV3 84 aa3.38□□□□□ -1.87
PRKCH-220ENST00000556164 TRBV24-1A0A075B6N3 115 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 D6R8Y8 96 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 J3QQQ9 107 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 APOC3P02656 99 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 Q5XG85 94 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 KRTAP9-8Q9BYQ0 159 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 SND1-IT1Q9HBX3 110 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 SMCO4Q9NRQ5 59 aa3.37□□□□□ -1.87
PRKCH-220ENST00000556164 COLCA2A8K830 154 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 NPYP01303 97 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 LINC00313P59037 77 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 C10orf91Q5T1B1 145 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 ALKAL2Q6UX46 152 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 TMEM141Q96I45 108 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
PRKCH-220ENST00000556164 MUC17Q685J3 4493 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 MRPL54Q6P161 138 aaKnown RBP3.35□□□□□ -1.87
PRKCH-220ENST00000556164 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 Q8IZM0 81 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 CEND1Q8N111 149 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 LINC00167Q96N53 147 aa3.35□□□□□ -1.87
PRKCH-220ENST00000556164 SMIM27A0A1W2PRY6 76 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 F8VRH5 84 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 SRP19P09132 144 aaKnown RBP3.34□□□□□ -1.87
PRKCH-220ENST00000556164 SPINK8P0C7L1 97 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 ADIRFQ15847 76 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.87
PRKCH-220ENST00000556164 IFITM1P13164 125 aa3.33□□□□□ -1.88
PRKCH-220ENST00000556164 KRTAP13-1Q8IUC0 172 aa3.33□□□□□ -1.88
PRKCH-220ENST00000556164 PRELID3AQ96N28 172 aa3.33□□□□□ -1.88
PRKCH-220ENST00000556164 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 TRBV7-6A0A0J9YX20 115 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 A0A1B0GW54 56 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 TMEM258P61165 79 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 PRLHP81277 87 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 HIST3H2BBQ8N257 126 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 AMELXQ99217 191 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 VAMP8Q9BV40 100 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
PRKCH-220ENST00000556164 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
PRKCH-220ENST00000556164 LST1O00453 97 aa3.31□□□□□ -1.88
PRKCH-220ENST00000556164 SEC11AP67812 179 aa3.31□□□□□ -1.88
PRKCH-220ENST00000556164 C3orf22Q8N5N4 141 aa3.31□□□□□ -1.88
PRKCH-220ENST00000556164 COPS9Q8WXC6 57 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms