RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 APC2O95996 2303 aa0.19□□□□□ -2.38
PCNX4-206ENST00000553513 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
PCNX4-206ENST00000553513 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
PCNX4-206ENST00000553513 BSNQ9UPA5 3926 aa0.19□□□□□ -2.38
PCNX4-206ENST00000553513 POLR1AO95602 1720 aaPredicted RBP0.18□□□□□ -2.38
PCNX4-206ENST00000553513 DCHS2Q6V1P9 2916 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 PDE4DIPQ5VU43 2346 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 ADIRFQ15847 76 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 COX6B2Q6YFQ2 88 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 WFDC9Q8NEX5 89 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 ARFGEF2Q9Y6D5 1785 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 RYR1P21817 5038 aa0.18□□□□□ -2.38
PCNX4-206ENST00000553513 DDX60LQ5H9U9 1706 aaKnown RBP0.18□□□□□ -2.38
PCNX4-206ENST00000553513 URB2Q14146 1524 aaKnown RBP0.18□□□□□ -2.38
PCNX4-206ENST00000553513 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
PCNX4-206ENST00000553513 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 KMT2CQ8NEZ4 4911 aaKnown RBP0.17□□□□□ -2.38
PCNX4-206ENST00000553513 FLNCQ14315 2725 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 ATP7BP35670 1465 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 PRM1P04553 51 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 PRKDCP78527 4128 aaKnown RBP0.17□□□□□ -2.38
PCNX4-206ENST00000553513 KNL1Q8NG31 2342 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 ST20Q9HBF5 79 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 CFAP43Q8NDM7 1665 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 PREX1Q8TCU6 1659 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 ABCC1P33527 1531 aa0.17□□□□□ -2.38
PCNX4-206ENST00000553513 HUWE1Q7Z6Z7 4374 aaKnown RBP0.17□□□□□ -2.38
PCNX4-206ENST00000553513 PIK3C2BO00750 1634 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.16□□□□□ -2.382e-6■■■■■ 50.1
PCNX4-206ENST00000553513 CCDC88BA6NC98 1476 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 MED14O60244 1454 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
PCNX4-206ENST00000553513 RGPD1P0DJD0 1748 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 COL7A1Q02388 2944 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 ABCA13Q86UQ4 5058 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 BPTFQ12830 3046 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 M0R2T5 61 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 ATP5EP2Q5VTU8 51 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 DOPEY1Q5JWR5 2465 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 LRRC7Q96NW7 1537 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 DCAF1Q9Y4B6 1507 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 ZANQ9Y493 2812 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
PCNX4-206ENST00000553513 TMEM131LA2VDJ0 1609 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 NESP48681 1621 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 MAGI2Q86UL8 1455 aa0.16□□□□□ -2.38
PCNX4-206ENST00000553513 THOC2Q8NI27 1593 aaKnown RBP0.15□□□□□ -2.38
PCNX4-206ENST00000553513 MYO18BQ8IUG5 2567 aa0.15□□□□□ -2.38
PCNX4-206ENST00000553513 SPTBN4Q9H254 2564 aa0.15□□□□□ -2.38
PCNX4-206ENST00000553513 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.38
PCNX4-206ENST00000553513 FAT2Q9NYQ8 4349 aa0.15□□□□□ -2.38
PCNX4-206ENST00000553513 TNRC6CQ9HCJ0 1690 aaKnown RBP0.15□□□□□ -2.39
PCNX4-206ENST00000553513 MAGI3Q5TCQ9 1506 aa0.15□□□□□ -2.39
PCNX4-206ENST00000553513 KDM5DQ9BY66 1539 aa0.15□□□□□ -2.39
PCNX4-206ENST00000553513 IFI27P40305 119 aaPredicted RBP0.15□□□□□ -2.39
PCNX4-206ENST00000553513 EP300Q09472 2414 aaPredicted RBP0.15□□□□□ -2.39
PCNX4-206ENST00000553513 HERC1Q15751 4861 aa0.15□□□□□ -2.39
PCNX4-206ENST00000553513 CFAP74Q9C0B2 1584 aa0.15□□□□□ -2.39
PCNX4-206ENST00000553513 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 EPPK1P58107 5090 aaKnown RBP0.14□□□□□ -2.39
PCNX4-206ENST00000553513 RRBP1Q9P2E9 1410 aaKnown RBP0.14□□□□□ -2.39
PCNX4-206ENST00000553513 C4AP0C0L4 1744 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 C4BP0C0L5 1744 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 ITSN1Q15811 1721 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 DOT1LQ8TEK3 1739 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 A0A087WXM4 84 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 UMAD1C9J7I0 102 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 SPRR2DP22532 72 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 DEFB121Q5J5C9 76 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 LELP1Q5T871 98 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 NBASA2RRP1 2371 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 STAB2Q8WWQ8 2551 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 ARHGAP35Q9NRY4 1499 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 ITPR3Q14573 2671 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 NWD1Q149M9 1564 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 PLCH1Q4KWH8 1693 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 ACANP16112 2415 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 PDZD2O15018 2839 aa0.14□□□□□ -2.39
PCNX4-206ENST00000553513 RNF213Q63HN8 5207 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 ANKARQ7Z5J8 1434 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.13□□□□□ -2.39
PCNX4-206ENST00000553513 HYDINQ4G0P3 5121 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 TRAV21A0A0B4J279 112 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 MRPL33O75394 65 aaKnown RBP0.13□□□□□ -2.39
PCNX4-206ENST00000553513 C3orf79P0CE67 100 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 CEP170BQ9Y4F5 1589 aaPredicted RBP0.13□□□□□ -2.39
PCNX4-206ENST00000553513 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 BIRC6Q9NR09 4857 aa0.13□□□□□ -2.39
PCNX4-206ENST00000553513 ANKRD11Q6UB99 2663 aaPredicted RBP0.12□□□□□ -2.39
PCNX4-206ENST00000553513 RYR3Q15413 4870 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 ZNF831Q5JPB2 1677 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 ERVK-7P63135 1459 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 PCNX1Q96RV3 2341 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 H0YGG7 62 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 TNRC18O15417 2968 aaPredicted RBP0.12□□□□□ -2.39
PCNX4-206ENST00000553513 SMIM13P0DJ93 91 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 TJP1Q07157 1748 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms