RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
TMED3-204ENST00000543455 IGLV5-37A0A075B6J1 123 aa11.15□□□□□ -0.62
TMED3-204ENST00000543455 A6NDN8 102 aa11.15□□□□□ -0.62
TMED3-204ENST00000543455 ZNF861PO60384 105 aa11.15□□□□□ -0.62
TMED3-204ENST00000543455 NPC2P61916 151 aa11.15□□□□□ -0.62
TMED3-204ENST00000543455 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
TMED3-204ENST00000543455 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
TMED3-204ENST00000543455 GAGE10A6NGK3 116 aa11.12□□□□□ -0.63
TMED3-204ENST00000543455 FXYD2P54710 66 aa11.12□□□□□ -0.63
TMED3-204ENST00000543455 IGLV1-50A0A075B6I6 118 aa11.11□□□□□ -0.63
TMED3-204ENST00000543455 A4D1N5 150 aa11.1□□□□□ -0.63
TMED3-204ENST00000543455 BCE1O60756 84 aa11.1□□□□□ -0.63
TMED3-204ENST00000543455 Q8NDZ9 215 aa11.1□□□□□ -0.63
TMED3-204ENST00000543455 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
TMED3-204ENST00000543455 A6NJY4 79 aa11.09□□□□□ -0.63
TMED3-204ENST00000543455 LPAP08519 4548 aa11.08□□□□□ -0.64
TMED3-204ENST00000543455 VPREB1P12018 145 aa11.08□□□□□ -0.64
TMED3-204ENST00000543455 KRTAP13-1Q8IUC0 172 aa11.07□□□□□ -0.64
TMED3-204ENST00000543455 A0A1B0GV90 55 aa11.06□□□□□ -0.64
TMED3-204ENST00000543455 NDUFC2O95298 119 aa11.06□□□□□ -0.64
TMED3-204ENST00000543455 NKAPP1Q8N9T2 125 aa11.06□□□□□ -0.64
TMED3-204ENST00000543455 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
TMED3-204ENST00000543455 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
TMED3-204ENST00000543455 RNF213Q63HN8 5207 aa11.04□□□□□ -0.64
TMED3-204ENST00000543455 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
TMED3-204ENST00000543455 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
TMED3-204ENST00000543455 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
TMED3-204ENST00000543455 CFC1P0CG37 223 aa11.04□□□□□ -0.64
TMED3-204ENST00000543455 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
TMED3-204ENST00000543455 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
TMED3-204ENST00000543455 A0A087X002 238 aa11.02□□□□□ -0.65
TMED3-204ENST00000543455 A0A0B4J2C4 111 aa11.02□□□□□ -0.65
TMED3-204ENST00000543455 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
TMED3-204ENST00000543455 K7ERJ3 54 aa11□□□□□ -0.65
TMED3-204ENST00000543455 RAB37Q96AX2 223 aa11□□□□□ -0.65
TMED3-204ENST00000543455 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
TMED3-204ENST00000543455 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
TMED3-204ENST00000543455 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
TMED3-204ENST00000543455 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
TMED3-204ENST00000543455 TMEM126AQ9H061 195 aa10.98□□□□□ -0.65
TMED3-204ENST00000543455 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
TMED3-204ENST00000543455 TRAV13-2A0A0B4J235 113 aa10.97□□□□□ -0.65
TMED3-204ENST00000543455 M0R378 163 aa10.97□□□□□ -0.65
TMED3-204ENST00000543455 NCR3O14931 201 aa10.97□□□□□ -0.65
TMED3-204ENST00000543455 UBE2AP49459 152 aa10.97□□□□□ -0.65
TMED3-204ENST00000543455 PRLHP81277 87 aa10.96□□□□□ -0.65
TMED3-204ENST00000543455 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
TMED3-204ENST00000543455 CRYGAP11844 174 aa10.93□□□□□ -0.66
TMED3-204ENST00000543455 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
TMED3-204ENST00000543455 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
TMED3-204ENST00000543455 IGLV6-57P01721 117 aa10.92□□□□□ -0.66
TMED3-204ENST00000543455 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
TMED3-204ENST00000543455 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.66
TMED3-204ENST00000543455 VAMP3Q15836 100 aa10.9□□□□□ -0.66
TMED3-204ENST00000543455 H7C2G1 150 aa10.89□□□□□ -0.67
TMED3-204ENST00000543455 TSPAN13O95857 204 aa10.89□□□□□ -0.67
TMED3-204ENST00000543455 UBE2V1Q13404 147 aa10.89□□□□□ -0.67
TMED3-204ENST00000543455 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
TMED3-204ENST00000543455 TYMSOSQ8TAI1 123 aa10.89□□□□□ -0.67
TMED3-204ENST00000543455 H3BUT2 72 aa10.88□□□□□ -0.67
TMED3-204ENST00000543455 FABP2P12104 132 aa10.88□□□□□ -0.67
TMED3-204ENST00000543455 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
TMED3-204ENST00000543455 FAM229BQ4G0N7 80 aa10.87□□□□□ -0.67
TMED3-204ENST00000543455 LYRM7Q5U5X0 104 aa10.87□□□□□ -0.67
TMED3-204ENST00000543455 Q1RN00 199 aa10.87□□□□□ -0.67
TMED3-204ENST00000543455 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
TMED3-204ENST00000543455 PRR4Q16378 134 aa10.85□□□□□ -0.67
TMED3-204ENST00000543455 CBY1Q9Y3M2 126 aa10.85□□□□□ -0.67
TMED3-204ENST00000543455 SPRR1AP35321 89 aa10.84□□□□□ -0.67
TMED3-204ENST00000543455 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
TMED3-204ENST00000543455 TRAV23DV6A0A075B6W5 121 aa10.83□□□□□ -0.68
TMED3-204ENST00000543455 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
TMED3-204ENST00000543455 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
TMED3-204ENST00000543455 PRYO14603 147 aa10.82□□□□□ -0.68
TMED3-204ENST00000543455 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
TMED3-204ENST00000543455 K7EP34 96 aa10.81□□□□□ -0.68
TMED3-204ENST00000543455 TRIAP1O43715 76 aa10.81□□□□□ -0.68
TMED3-204ENST00000543455 PSMB2P49721 201 aa10.81□□□□□ -0.68
TMED3-204ENST00000543455 C3orf22Q8N5N4 141 aa10.81□□□□□ -0.68
TMED3-204ENST00000543455 SPCS1Q9Y6A9 102 aa10.81□□□□□ -0.68
TMED3-204ENST00000543455 ZNF73O43830 326 aaPredicted RBP10.8□□□□□ -0.68
TMED3-204ENST00000543455 SPRR4Q96PI1 79 aa10.8□□□□□ -0.68
TMED3-204ENST00000543455 C6orf99Q4VX62 202 aa10.79□□□□□ -0.68
TMED3-204ENST00000543455 LINC00304Q8N9R0 145 aa10.78□□□□□ -0.68
TMED3-204ENST00000543455 TRBV20-1A0A075B6N2 111 aa10.77□□□□□ -0.69
TMED3-204ENST00000543455 COX6CP09669 75 aa10.77□□□□□ -0.69
TMED3-204ENST00000543455 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
TMED3-204ENST00000543455 SCGB1C2P0DMR2 95 aa10.75□□□□□ -0.69
TMED3-204ENST00000543455 SMCR5Q8TEV8 140 aa10.75□□□□□ -0.69
TMED3-204ENST00000543455 H0YGX0 51 aa10.74□□□□□ -0.69
TMED3-204ENST00000543455 RETNLBQ9BQ08 111 aa10.74□□□□□ -0.69
TMED3-204ENST00000543455 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
TMED3-204ENST00000543455 B5MCH6 92 aa10.72□□□□□ -0.69
TMED3-204ENST00000543455 COX7BP24311 80 aa10.72□□□□□ -0.69
TMED3-204ENST00000543455 ELOF1P60002 83 aaKnown RBP10.72□□□□□ -0.69
TMED3-204ENST00000543455 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
TMED3-204ENST00000543455 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
TMED3-204ENST00000543455 MUC2Q02817 5179 aa10.7□□□□□ -0.7
TMED3-204ENST00000543455 F8W1H4 67 aa10.69□□□□□ -0.7
TMED3-204ENST00000543455 Q9BRP9 147 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms