RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SERP2	Q8N6R1	65 aa		4.26	□□□□□ -1.73
CIT-213	ENST00000543324	OBSCN-AS1	Q96MR7	158 aa		4.26	□□□□□ -1.73
CIT-213	ENST00000543324	UBE2D4	Q9Y2X8	147 aa		4.26	□□□□□ -1.73
CIT-213	ENST00000543324	LOC107984640	A0A0U1RRK4	108 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	LRCOL1	A6NCL2	159 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	BAALC-AS2	P0C853	105 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	RPL28	P46779	137 aa	Known RBP	4.25	□□□□□ -1.73
CIT-213	ENST00000543324	DPH3	Q96FX2	82 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	KRTAP4-12	Q9BQ66	201 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	CHCHD7	Q9BUK0	85 aa		4.25	□□□□□ -1.73
CIT-213	ENST00000543324	SYNE2	Q8WXH0	6885 aa	Known RBP	4.24	□□□□□ -1.73
CIT-213	ENST00000543324	IBA57-AS1	B1ANH7	110 aa		4.24	□□□□□ -1.73
CIT-213	ENST00000543324	MAL	P21145	153 aa		4.24	□□□□□ -1.73
CIT-213	ENST00000543324	FAM74A4	Q5TZK3	123 aa		4.24	□□□□□ -1.73
CIT-213	ENST00000543324	TRAV13-2	A0A0B4J235	113 aa		4.23	□□□□□ -1.73
CIT-213	ENST00000543324	IGHV3-38	A0A0C4DH36	116 aa		4.23	□□□□□ -1.73
CIT-213	ENST00000543324	BCE1	O60756	84 aa		4.23	□□□□□ -1.73
CIT-213	ENST00000543324	ATP5EP2	Q5VTU8	51 aa		4.23	□□□□□ -1.73
CIT-213	ENST00000543324	SOSTDC1	Q6X4U4	206 aa		4.23	□□□□□ -1.73
CIT-213	ENST00000543324	hADV29S1	A0JD25	119 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324		H0YGX0	51 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	NDUFC2	O95298	119 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	NPC2	P61916	151 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	S100A7L2	Q5SY68	101 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	ZNF625	Q96I27	306 aa	Predicted RBP	4.22	□□□□□ -1.73
CIT-213	ENST00000543324		Q9UF83	564 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	CDKN2A-AS1	Q9UH64	79 aa		4.22	□□□□□ -1.73
CIT-213	ENST00000543324	TRBV10-3	A0A0K0K1G6	114 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	SMIM1	B2RUZ4	78 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	DNAL4	O96015	105 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324		Q5XG85	94 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324		Q6ZSA8	131 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	FAM218A	Q96MZ4	157 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	KRTAP9-9	Q9BYP9	154 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	KRTAP9-4	Q9BYQ2	154 aa		4.21	□□□□□ -1.74
CIT-213	ENST00000543324	USP17L23	D6RBM5	183 aa		4.2	□□□□□ -1.74
CIT-213	ENST00000543324	CRP	P02741	224 aa		4.2	□□□□□ -1.74
CIT-213	ENST00000543324	LINC00242	Q5T6M2	205 aa		4.2	□□□□□ -1.74
CIT-213	ENST00000543324		Q8N814	137 aa		4.2	□□□□□ -1.74
CIT-213	ENST00000543324	LINC00167	Q96N53	147 aa		4.2	□□□□□ -1.74
CIT-213	ENST00000543324	IGHV3-73	A0A0B4J1V6	119 aa		4.19	□□□□□ -1.74
CIT-213	ENST00000543324	TRAV13-1	A0A0B4J241	112 aa		4.19	□□□□□ -1.74
CIT-213	ENST00000543324	LINC01561	Q8N1V8	128 aa		4.19	□□□□□ -1.74
CIT-213	ENST00000543324	CYSTM1	Q9H1C7	97 aa		4.19	□□□□□ -1.74
CIT-213	ENST00000543324	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.18	□□□□□ -1.74
CIT-213	ENST00000543324	TRBV10-1	A0A0K0K1A3	114 aa		4.18	□□□□□ -1.74
CIT-213	ENST00000543324	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.18	□□□□□ -1.74
CIT-213	ENST00000543324	COX6A2	Q02221	97 aa		4.18	□□□□□ -1.74
CIT-213	ENST00000543324	LINC00846	Q9NV44	126 aa		4.18	□□□□□ -1.74
CIT-213	ENST00000543324	FAM30A	Q9NZY2	134 aa		4.18	□□□□□ -1.74
CIT-213	ENST00000543324	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.17	□□□□□ -1.74
CIT-213	ENST00000543324	PANO1	I0J062	215 aa		4.17	□□□□□ -1.74
CIT-213	ENST00000543324	CCK	P06307	115 aa		4.17	□□□□□ -1.74
CIT-213	ENST00000543324	RNASE13	Q5GAN3	156 aa	Known RBP	4.17	□□□□□ -1.74
CIT-213	ENST00000543324	DGAT2L7P	Q6IED9	249 aa		4.17	□□□□□ -1.74
CIT-213	ENST00000543324	SERP1	Q9Y6X1	66 aa		4.17	□□□□□ -1.74
CIT-213	ENST00000543324	IGKV2-28	A0A075B6P5	120 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	IGLV5-52	A0A0A0MRZ9	124 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	IGKV3D-7	A0A0C4DH55	119 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	KRTAP4-8	A0A0G2JLE6	195 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	IGKV2D-28	P01615	120 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	LINC00337	Q8N6G1	96 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324		Q9HAA7	133 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	CDC42SE2	Q9NRR3	84 aa		4.16	□□□□□ -1.74
CIT-213	ENST00000543324	MACF1	Q9UPN3	7388 aa	Known RBP	4.15	□□□□□ -1.74
CIT-213	ENST00000543324		A0A087WYN8	130 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	FAM236D	A0A1B0GTK5	79 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	PSCA	O43653	123 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	FAM236C	P0DP71	79 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	SS18	Q15532	418 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	KRTAP19-1	Q8IUB9	90 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	SMIM11B	Q8TCY0	68 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	DSCR8	Q96T75	97 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	SND1-IT1	Q9HBX3	110 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	C14orf132	Q9NPU4	83 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	ORMDL1	Q9P0S3	153 aa		4.15	□□□□□ -1.75
CIT-213	ENST00000543324	TRAV7	A0A075B6U4	112 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	TRBV6-8	A0A0A6YYG3	113 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	ATP5E	P56381	51 aa	Predicted RBP	4.14	□□□□□ -1.75
CIT-213	ENST00000543324	KLKP1	Q107X0	134 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	C4orf26	Q17RF5	130 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	C9orf129	Q5T035	196 aa	Known RBP	4.14	□□□□□ -1.75
CIT-213	ENST00000543324	KRTAP26-1	Q6PEX3	210 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	NTM-AS1	Q6ZSK4	140 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	COX7B2	Q8TF08	81 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	PRR34	Q9NV39	138 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324	PRO0628	Q9UI54	55 aa		4.14	□□□□□ -1.75
CIT-213	ENST00000543324		A0A087WVE0	104 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	LECT2	O14960	151 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	PFN2	P35080	140 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	XCL1	P47992	114 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	RPL36A	P83881	106 aa	Known RBP	4.13	□□□□□ -1.75
CIT-213	ENST00000543324	ENHO	Q6UWT2	76 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	HRCT1	Q6UXD1	115 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	MIR7-3HG	Q8N6C7	128 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	RPL36AL	Q969Q0	106 aa	Known RBP	4.13	□□□□□ -1.75
CIT-213	ENST00000543324	TMEM243	Q9BU79	118 aa		4.13	□□□□□ -1.75
CIT-213	ENST00000543324	USH2A	O75445	5202 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324	SMIM26	A0A096LP01	95 aa		4.12	□□□□□ -1.75
CIT-213	ENST00000543324		A0A0U1RRA0	63 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms