RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RB1CC1Q8TDY2 1594 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 CHD6Q8TD26 2715 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 SPRR2BP35325 72 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 DEFB121Q5J5C9 76 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 C18orf32Q8TCD1 76 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 CACNA1AO00555 2505 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 LTN1O94822 1766 aa-0.01□□□□□ -2.41
MDM2-227ENST00000540709 TMEM131LA2VDJ0 1609 aa-0.02□□□□□ -2.41
MDM2-227ENST00000540709 USP32Q8NFA0 1604 aa-0.02□□□□□ -2.41
MDM2-227ENST00000540709 MED14O60244 1454 aa-0.03□□□□□ -2.41
MDM2-227ENST00000540709 ERVK-7P63135 1459 aa-0.03□□□□□ -2.41
MDM2-227ENST00000540709 POLR1AO95602 1720 aaPredicted RBP-0.03□□□□□ -2.41
MDM2-227ENST00000540709 HMGA1P17096 107 aaKnown RBP-0.03□□□□□ -2.41
MDM2-227ENST00000540709 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.03□□□□□ -2.41
MDM2-227ENST00000540709 PIK3C2BO00750 1634 aa-0.03□□□□□ -2.41
MDM2-227ENST00000540709 SPTA1P02549 2419 aa-0.03□□□□□ -2.41
MDM2-227ENST00000540709 NWD1Q149M9 1564 aa-0.03□□□□□ -2.41
MDM2-227ENST00000540709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.03□□□□□ -2.41
MDM2-227ENST00000540709 EP300Q09472 2414 aaPredicted RBP-0.04□□□□□ -2.42
MDM2-227ENST00000540709 DOT1LQ8TEK3 1739 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 FLNCQ14315 2725 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 WNK1Q9H4A3 2382 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 APC2O95996 2303 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 ATRQ13535 2644 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 CICQ96RK0 1608 aaPredicted RBP-0.04□□□□□ -2.42
MDM2-227ENST00000540709 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 MRPL33O75394 65 aaKnown RBP-0.04□□□□□ -2.42
MDM2-227ENST00000540709 MAP1BP46821 2468 aaKnown RBP-0.04□□□□□ -2.42
MDM2-227ENST00000540709 ABCC1P33527 1531 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 DCAF1Q9Y4B6 1507 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 ARFGEF2Q9Y6D5 1785 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 ARHGAP35Q9NRY4 1499 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 HSPG2P98160 4391 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.04□□□□□ -2.42
MDM2-227ENST00000540709 C4AP0C0L4 1744 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 C4BP0C0L5 1744 aa-0.04□□□□□ -2.42
MDM2-227ENST00000540709 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 ZNF831Q5JPB2 1677 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 LPAP08519 4548 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 H3BNG1 76 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 ENHOQ6UWT2 76 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 UBL5Q9BZL1 73 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 GNG13Q9P2W3 67 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 TIAM2Q8IVF5 1701 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 ANKARQ7Z5J8 1434 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
MDM2-227ENST00000540709 DCHS2Q6V1P9 2916 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 DIP2BQ9P265 1576 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.06□□□□□ -2.42
MDM2-227ENST00000540709 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
MDM2-227ENST00000540709 MAGI3Q5TCQ9 1506 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 CNOT1A5YKK6 2376 aaKnown RBP-0.06□□□□□ -2.42
MDM2-227ENST00000540709 DEFB131BA0A096LNP1 70 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 LCE6AA0A183 80 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 H0YAA0 97 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 DEFB130BP0DP73 79 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 DEFB130AP0DP74 79 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 IAPPP10997 89 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 NESP48681 1621 aa-0.06□□□□□ -2.42
MDM2-227ENST00000540709 FLNBO75369 2602 aaKnown RBP-0.06□□□□□ -2.42
MDM2-227ENST00000540709 MYCBP2O75592 4640 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 TNXBP22105 4242 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 KDM5DQ9BY66 1539 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 CCDC88BA6NC98 1476 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 FSIP2Q5CZC0 6907 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 PDCD5O14737 125 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 CRIP1P50238 77 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 ATXN8Q156A1 80 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 SMCO4Q9NRQ5 59 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 HILPDAQ9Y5L2 63 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 PCNX1Q96RV3 2341 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 HFM1A2PYH4 1435 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 RRBP1Q9P2E9 1410 aaKnown RBP-0.07□□□□□ -2.42
MDM2-227ENST00000540709 ANKRD50Q9ULJ7 1429 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 SYNE2Q8WXH0 6885 aaKnown RBP-0.07□□□□□ -2.42
MDM2-227ENST00000540709 ACANP16112 2415 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 DDX60LQ5H9U9 1706 aaKnown RBP-0.07□□□□□ -2.42
MDM2-227ENST00000540709 RICTORQ6R327 1708 aa-0.07□□□□□ -2.42
MDM2-227ENST00000540709 NSD1Q96L73 2696 aaPredicted RBP-0.08□□□□□ -2.42
MDM2-227ENST00000540709 KNL1Q8NG31 2342 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 RALGAPBQ86X10 1494 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 PTPN23Q9H3S7 1636 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 ETDCA0A1B0GVM5 59 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 C9orf92A6NGG3 77 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 LYNX1G3V0Z9 82 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 KRTAP6-2Q3LI66 62 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 ADAMTS12P58397 1594 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
MDM2-227ENST00000540709 BSNQ9UPA5 3926 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 FLNAP21333 2647 aaKnown RBP-0.08□□□□□ -2.42
MDM2-227ENST00000540709 PLCH1Q4KWH8 1693 aa-0.08□□□□□ -2.42
MDM2-227ENST00000540709 FAT2Q9NYQ8 4349 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 SCN11AQ9UI33 1791 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 PDE4DIPQ5VU43 2346 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 STAB1Q9NY15 2570 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms