RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
MDM2-226ENST00000540352 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
MDM2-226ENST00000540352 BOD1L1Q8NFC6 3051 aa3.04□□□□□ -1.92
MDM2-226ENST00000540352 CHD8Q9HCK8 2581 aa3.04□□□□□ -1.92
MDM2-226ENST00000540352 IGLV5-48A0A075B6I7 105 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 A8MTW9 85 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
MDM2-226ENST00000540352 USMG5Q96IX5 58 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 RHPN1-AS1Q9BWJ2 59 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 KLK12Q9UKR0 248 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 CACNA1AO00555 2505 aa3.03□□□□□ -1.92
MDM2-226ENST00000540352 ANKRD11Q6UB99 2663 aaPredicted RBP3.02□□□□□ -1.93
MDM2-226ENST00000540352 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
MDM2-226ENST00000540352 DSCR10P59022 87 aa3.02□□□□□ -1.93
MDM2-226ENST00000540352 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
MDM2-226ENST00000540352 CSAG1Q6PB30 78 aa3.02□□□□□ -1.93
MDM2-226ENST00000540352 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
MDM2-226ENST00000540352 LINC00959A0A1B0GUT2 108 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 A0A1W2PNU3 283 aaPredicted RBP3.01□□□□□ -1.93
MDM2-226ENST00000540352 SPINK13Q1W4C9 94 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 Q6ZR54 194 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 BSNQ9UPA5 3926 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 ABCA1O95477 2261 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 NCOR2Q9Y618 2525 aa3.01□□□□□ -1.93
MDM2-226ENST00000540352 K7EQZ3 153 aa3□□□□□ -1.93
MDM2-226ENST00000540352 KALRNO60229 2985 aa3□□□□□ -1.93
MDM2-226ENST00000540352 SPRR4Q96PI1 79 aa3□□□□□ -1.93
MDM2-226ENST00000540352 PIEZO2Q9H5I5 2752 aa3□□□□□ -1.93
MDM2-226ENST00000540352 IGF2RP11717 2491 aa3□□□□□ -1.93
MDM2-226ENST00000540352 AHCTF1Q8WYP5 2266 aa3□□□□□ -1.93
MDM2-226ENST00000540352 URB1O60287 2271 aaKnown RBP2.99□□□□□ -1.93
MDM2-226ENST00000540352 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 REG3GQ6UW15 175 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 PLCE1Q9P212 2302 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 CACNA1GO43497 2377 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 SPENQ96T58 3664 aaKnown RBP2.99□□□□□ -1.93
MDM2-226ENST00000540352 ACACAQ13085 2346 aa2.99□□□□□ -1.93
MDM2-226ENST00000540352 MAP1BP46821 2468 aaKnown RBP2.98□□□□□ -1.93
MDM2-226ENST00000540352 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
MDM2-226ENST00000540352 APC2O95996 2303 aa2.98□□□□□ -1.93
MDM2-226ENST00000540352 IGSF10Q6WRI0 2623 aa2.98□□□□□ -1.93
MDM2-226ENST00000540352 CR1P17927 2039 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 IGKV3-7A0A075B6H7 116 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 IGLV1-50A0A075B6I6 118 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 G3V318 75 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 Q8N377 158 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 USP24Q9UPU5 2620 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 ACACBO00763 2458 aa2.97□□□□□ -1.93
MDM2-226ENST00000540352 TPRP12270 2363 aaKnown RBP2.97□□□□□ -1.93
MDM2-226ENST00000540352 SMG1Q96Q15 3661 aaKnown RBP2.96□□□□□ -1.93
MDM2-226ENST00000540352 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.93
MDM2-226ENST00000540352 INSP01308 110 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 MSMBP08118 114 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 REG3AQ06141 175 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 C5orf56Q8N8D9 126 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 Q8NDZ9 215 aa2.96□□□□□ -1.93
MDM2-226ENST00000540352 CFAP46Q8IYW2 2715 aa2.96□□□□□ -1.94
MDM2-226ENST00000540352 KMT2BQ9UMN6 2715 aaPredicted RBP2.96□□□□□ -1.94
MDM2-226ENST00000540352 A0A087WSZ3 146 aa2.95□□□□□ -1.94
MDM2-226ENST00000540352 UQCR11O14957 56 aa2.95□□□□□ -1.94
MDM2-226ENST00000540352 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
MDM2-226ENST00000540352 CHD6Q8TD26 2715 aa2.95□□□□□ -1.94
MDM2-226ENST00000540352 UTP20O75691 2785 aaKnown RBP2.95□□□□□ -1.94
MDM2-226ENST00000540352 PKD1L2Q7Z442 2459 aa2.95□□□□□ -1.94
MDM2-226ENST00000540352 IGKV3OR2-268A0A0C4DH90 116 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 HRES1P13985 223 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 C1orf137Q5JT78 98 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 CSNK1G2-AS1Q8NCQ2 148 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 COL12A1Q99715 3063 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 EPG5Q9HCE0 2579 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 NOTCH3Q9UM47 2321 aa2.94□□□□□ -1.94
MDM2-226ENST00000540352 ZNF861PO60384 105 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 HTN1P15515 57 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 WFDC13Q8IUB5 93 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 PRR34Q9NV39 138 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 ATRXP46100 2492 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 SORL1Q92673 2214 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 FLNCQ14315 2725 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 TRGV1A0A0A0MS02 117 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 A0A1B0GU69 56 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 A8MWP4 228 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 DEFB109BQ30KR1 87 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 WFDC10BQ8IUB3 73 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 ZFYVE26Q68DK2 2539 aa2.93□□□□□ -1.94
MDM2-226ENST00000540352 TLN1Q9Y490 2541 aaKnown RBP2.93□□□□□ -1.94
MDM2-226ENST00000540352 CACNA1BQ00975 2339 aa2.92□□□□□ -1.94
MDM2-226ENST00000540352 TENM4Q6N022 2769 aa2.92□□□□□ -1.94
MDM2-226ENST00000540352 MED13LQ71F56 2210 aa2.92□□□□□ -1.94
MDM2-226ENST00000540352 A0A1W2PPR1 153 aa2.92□□□□□ -1.94
MDM2-226ENST00000540352 LINC00483Q53H64 154 aa2.92□□□□□ -1.94
MDM2-226ENST00000540352 RELNP78509 3460 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 ABCA4P78363 2273 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 CRYBG3Q68DQ2 2970 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 LRBAP50851 2863 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 C7orf33Q8WU49 177 aa2.91□□□□□ -1.94
MDM2-226ENST00000540352 DMAC1Q96GE9 116 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms