RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 KCNQ1DNQ9H478 68 aa5.91□□□□□ -1.46
SNHG1-209ENST00000538654 DHRS4-AS1Q9P1J3 65 aa5.91□□□□□ -1.46
SNHG1-209ENST00000538654 DEFB105AQ8NG35 78 aa5.9□□□□□ -1.47
SNHG1-209ENST00000538654 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
SNHG1-209ENST00000538654 SPART-AS1P0CW21 52 aa5.89□□□□□ -1.47
SNHG1-209ENST00000538654 NKAPP1Q8N9T2 125 aa5.89□□□□□ -1.47
SNHG1-209ENST00000538654 Q8NBF4 154 aa5.89□□□□□ -1.47
SNHG1-209ENST00000538654 CSMD2Q7Z408 3487 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 TRAV22A0A0B4J277 110 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 LRCOL1A6NCL2 159 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 DEFB4AO15263 64 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 TEX15Q9BXT5 2789 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-209ENST00000538654 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 RPL37AP8A6NKH3 93 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 DEFB135Q30KP9 77 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
SNHG1-209ENST00000538654 NCOR2Q9Y618 2525 aa5.87□□□□□ -1.47
SNHG1-209ENST00000538654 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
SNHG1-209ENST00000538654 HTN3P15516 51 aa5.87□□□□□ -1.47
SNHG1-209ENST00000538654 PSPHP1O15172 72 aa5.86□□□□□ -1.47
SNHG1-209ENST00000538654 PSCAO43653 123 aa5.86□□□□□ -1.47
SNHG1-209ENST00000538654 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
SNHG1-209ENST00000538654 DSCR10P59022 87 aa5.86□□□□□ -1.47
SNHG1-209ENST00000538654 KRTAP10-9P60411 292 aa5.86□□□□□ -1.47
SNHG1-209ENST00000538654 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
SNHG1-209ENST00000538654 EPG5Q9HCE0 2579 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 Q6ZRX8 168 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 LCA10Q71F78 164 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 PTPN13Q12923 2485 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 FN1P02751 2386 aaKnown RBP5.85□□□□□ -1.47
SNHG1-209ENST00000538654 KRTAP1-3Q8IUG1 177 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 Q8NAQ8 132 aa5.85□□□□□ -1.47
SNHG1-209ENST00000538654 KRTAP26-1Q6PEX3 210 aa5.84□□□□□ -1.47
SNHG1-209ENST00000538654 LRRK2Q5S007 2527 aa5.84□□□□□ -1.47
SNHG1-209ENST00000538654 K7EQZ3 153 aa5.84□□□□□ -1.47
SNHG1-209ENST00000538654 C7orf33Q8WU49 177 aa5.84□□□□□ -1.47
SNHG1-209ENST00000538654 FBN2P35556 2912 aa5.84□□□□□ -1.47
SNHG1-209ENST00000538654 CHD8Q9HCK8 2581 aa5.84□□□□□ -1.48
SNHG1-209ENST00000538654 NBPF19A0A087WUL8 3843 aa5.84□□□□□ -1.48
SNHG1-209ENST00000538654 FLNCQ14315 2725 aa5.83□□□□□ -1.48
SNHG1-209ENST00000538654 POLQO75417 2590 aa5.83□□□□□ -1.48
SNHG1-209ENST00000538654 UBE2BP63146 152 aa5.83□□□□□ -1.48
SNHG1-209ENST00000538654 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
SNHG1-209ENST00000538654 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 B9D2Q9BPU9 175 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 ST20-AS1Q8NBB2 130 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 LIMD2Q9BT23 127 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 APCP25054 2843 aa5.82□□□□□ -1.48
SNHG1-209ENST00000538654 H3BNG1 76 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 H3BPC8 53 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 UBE2AP49459 152 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 NAV2Q8IVL1 2488 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 IGLV5-52A0A0A0MRZ9 124 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 Q9BRP9 147 aa5.81□□□□□ -1.48
SNHG1-209ENST00000538654 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-209ENST00000538654 SPRR1AP35321 89 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 WFDC10BQ8IUB3 73 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 PRR4Q16378 134 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 LINC01554Q52M75 96 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 GCN1Q92616 2671 aaKnown RBP5.8□□□□□ -1.48
SNHG1-209ENST00000538654 SPTBN4Q9H254 2564 aa5.8□□□□□ -1.48
SNHG1-209ENST00000538654 NIPBLQ6KC79 2804 aaeCLIP5.79□□□□□ -1.488e-27■■■■□ 21.5
SNHG1-209ENST00000538654 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
SNHG1-209ENST00000538654 ZFYVE26Q68DK2 2539 aa5.79□□□□□ -1.48
SNHG1-209ENST00000538654 ACACBO00763 2458 aa5.79□□□□□ -1.48
SNHG1-209ENST00000538654 IGLV1-50A0A075B6I6 118 aa5.79□□□□□ -1.48
SNHG1-209ENST00000538654 Q5VV11 94 aa5.79□□□□□ -1.48
SNHG1-209ENST00000538654 PKD1L2Q7Z442 2459 aa5.78□□□□□ -1.48
SNHG1-209ENST00000538654 LINC00208Q96KT6 92 aa5.78□□□□□ -1.48
SNHG1-209ENST00000538654 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
SNHG1-209ENST00000538654 NF1P21359 2839 aa5.77□□□□□ -1.49
SNHG1-209ENST00000538654 SONP18583 2426 aaKnown RBP5.77□□□□□ -1.49
SNHG1-209ENST00000538654 MYO18BQ8IUG5 2567 aa5.77□□□□□ -1.49
SNHG1-209ENST00000538654 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
SNHG1-209ENST00000538654 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SNHG1-209ENST00000538654 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
SNHG1-209ENST00000538654 NBEAL2Q6ZNJ1 2754 aa5.76□□□□□ -1.49
SNHG1-209ENST00000538654 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-209ENST00000538654 LINC00476Q8WZB0 136 aa5.76□□□□□ -1.49
SNHG1-209ENST00000538654 LINC01556Q5JQF7 62 aa5.75□□□□□ -1.49
SNHG1-209ENST00000538654 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
SNHG1-209ENST00000538654 FAM208BQ5VWN6 2430 aa5.75□□□□□ -1.49
SNHG1-209ENST00000538654 SETD2Q9BYW2 2564 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-209ENST00000538654 KRTAP10-3P60369 221 aa5.75□□□□□ -1.49
SNHG1-209ENST00000538654 H0Y9P7 68 aa5.74□□□□□ -1.49
SNHG1-209ENST00000538654 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
SNHG1-209ENST00000538654 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
SNHG1-209ENST00000538654 ITPR3Q14573 2671 aa5.74□□□□□ -1.49
SNHG1-209ENST00000538654 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
SNHG1-209ENST00000538654 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-209ENST00000538654 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
SNHG1-209ENST00000538654 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
SNHG1-209ENST00000538654 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
SNHG1-209ENST00000538654 CENPEQ02224 2701 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms