RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	LPA	P08519	4548 aa		0.13	□□□□□ -2.39
MED17-208	ENST00000531920	ARHGAP35	Q9NRY4	1499 aa		0.12	□□□□□ -2.39
MED17-208	ENST00000531920	NDUFB1	O75438	58 aa		0.12	□□□□□ -2.39
MED17-208	ENST00000531920	WFDC13	Q8IUB5	93 aa		0.12	□□□□□ -2.39
MED17-208	ENST00000531920	RGPD8	O14715	1765 aa	Predicted RBP	0.11	□□□□□ -2.39
MED17-208	ENST00000531920	RGPD5	Q99666	1765 aa		0.11	□□□□□ -2.39
MED17-208	ENST00000531920	SPTA1	P02549	2419 aa		0.11	□□□□□ -2.39
MED17-208	ENST00000531920		H3BUT2	72 aa		0.11	□□□□□ -2.39
MED17-208	ENST00000531920	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.11	□□□□□ -2.39	2e-13	■■■■■ 27.2
MED17-208	ENST00000531920	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.11	□□□□□ -2.39
MED17-208	ENST00000531920	HMCN2	Q8NDA2	5059 aa		0.11	□□□□□ -2.39
MED17-208	ENST00000531920	MACF1	Q9UPN3	7388 aa	Known RBP	0.1	□□□□□ -2.39
MED17-208	ENST00000531920	ALMS1	Q8TCU4	4167 aa		0.1	□□□□□ -2.39
MED17-208	ENST00000531920		M0R2T5	61 aa		0.1	□□□□□ -2.39
MED17-208	ENST00000531920	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.1	□□□□□ -2.39
MED17-208	ENST00000531920	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.1	□□□□□ -2.39
MED17-208	ENST00000531920	HSPG2	P98160	4391 aa		0.08	□□□□□ -2.4
MED17-208	ENST00000531920	ARFGEF2	Q9Y6D5	1785 aa		0.08	□□□□□ -2.4
MED17-208	ENST00000531920	PRKDC	P78527	4128 aa	Known RBP	0.07	□□□□□ -2.4
MED17-208	ENST00000531920	NDUFA3	O95167	84 aa		0.07	□□□□□ -2.4
MED17-208	ENST00000531920	MAGI3	Q5TCQ9	1506 aa		0.07	□□□□□ -2.4
MED17-208	ENST00000531920	C4A	P0C0L4	1744 aa		0.07	□□□□□ -2.4
MED17-208	ENST00000531920	C4B	P0C0L5	1744 aa		0.07	□□□□□ -2.4
MED17-208	ENST00000531920	NWD1	Q149M9	1564 aa		0.06	□□□□□ -2.4
MED17-208	ENST00000531920	UMAD1	C9J7I0	102 aa		0.06	□□□□□ -2.4
MED17-208	ENST00000531920	IFI6	P09912	130 aa		0.06	□□□□□ -2.4
MED17-208	ENST00000531920	BVES-AS1	Q5T3Y7	98 aa		0.06	□□□□□ -2.4
MED17-208	ENST00000531920	KDM5D	Q9BY66	1539 aa		0.06	□□□□□ -2.4
MED17-208	ENST00000531920	NES	P48681	1621 aa		0.05	□□□□□ -2.4
MED17-208	ENST00000531920	SSPO	A2VEC9	5147 aa		0.05	□□□□□ -2.4
MED17-208	ENST00000531920		A0A087WXM4	84 aa		0.05	□□□□□ -2.4
MED17-208	ENST00000531920	ATP5EP2	Q5VTU8	51 aa		0.05	□□□□□ -2.4
MED17-208	ENST00000531920	FLNC	Q14315	2725 aa		0.04	□□□□□ -2.4
MED17-208	ENST00000531920	DEFB121	Q5J5C9	76 aa		0.04	□□□□□ -2.4
MED17-208	ENST00000531920	EP300	Q09472	2414 aa	Predicted RBP	0.04	□□□□□ -2.4
MED17-208	ENST00000531920	IFI27	P40305	119 aa	Predicted RBP	0.03	□□□□□ -2.4
MED17-208	ENST00000531920	DEFB135	Q30KP9	77 aa		0.03	□□□□□ -2.4
MED17-208	ENST00000531920	COX6B2	Q6YFQ2	88 aa		0.03	□□□□□ -2.4
MED17-208	ENST00000531920	SCRIB	Q14160	1630 aa		0.02	□□□□□ -2.41
MED17-208	ENST00000531920	SMIM13	P0DJ93	91 aa		0.02	□□□□□ -2.41
MED17-208	ENST00000531920	ABCC1	P33527	1531 aa		0.02	□□□□□ -2.41
MED17-208	ENST00000531920	CHD8	Q9HCK8	2581 aa		0.01	□□□□□ -2.41
MED17-208	ENST00000531920	CFAP74	Q9C0B2	1584 aa		0.01	□□□□□ -2.41
MED17-208	ENST00000531920	CFAP43	Q8NDM7	1665 aa		0.01	□□□□□ -2.41
MED17-208	ENST00000531920	SCN11A	Q9UI33	1791 aa		0.01	□□□□□ -2.41
MED17-208	ENST00000531920	WNK1	Q9H4A3	2382 aa		0.01	□□□□□ -2.41
MED17-208	ENST00000531920	MAP1B	P46821	2468 aa	Known RBP	0	□□□□□ -2.41
MED17-208	ENST00000531920	NREP	Q16612	68 aa		0	□□□□□ -2.41
MED17-208	ENST00000531920	PLCH1	Q4KWH8	1693 aa		-0.01	□□□□□ -2.41
MED17-208	ENST00000531920	CNOT1	A5YKK6	2376 aa	Known RBP	-0.02	□□□□□ -2.41
MED17-208	ENST00000531920	RRBP1	Q9P2E9	1410 aa	Known RBP	-0.02	□□□□□ -2.41
MED17-208	ENST00000531920	HECTD4	Q9Y4D8	3996 aa		-0.02	□□□□□ -2.41
MED17-208	ENST00000531920	RICTOR	Q6R327	1708 aa		-0.03	□□□□□ -2.41
MED17-208	ENST00000531920	C18orf32	Q8TCD1	76 aa		-0.03	□□□□□ -2.41
MED17-208	ENST00000531920	DCHS2	Q6V1P9	2916 aa		-0.03	□□□□□ -2.42
MED17-208	ENST00000531920	APC2	O95996	2303 aa		-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	KNL1	Q8NG31	2342 aa		-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	CIC	Q96RK0	1608 aa	Predicted RBP	-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	NDUFA4	O00483	81 aa		-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	SPRR2B	P35325	72 aa		-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	NSD1	Q96L73	2696 aa	Predicted RBP	-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	CCDC88B	A6NC98	1476 aa		-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	DDX60L	Q5H9U9	1706 aa	Known RBP	-0.04	□□□□□ -2.42
MED17-208	ENST00000531920	SETX	Q7Z333	2677 aa	Known RBP	-0.05	□□□□□ -2.42
MED17-208	ENST00000531920	REV3L	O60673	3130 aa		-0.05	□□□□□ -2.42
MED17-208	ENST00000531920	PRO3102	Q9H379	93 aa		-0.05	□□□□□ -2.42
MED17-208	ENST00000531920	LCE6A	A0A183	80 aa		-0.06	□□□□□ -2.42
MED17-208	ENST00000531920	PTPN23	Q9H3S7	1636 aa		-0.06	□□□□□ -2.42
MED17-208	ENST00000531920	ADAMTS12	P58397	1594 aa		-0.06	□□□□□ -2.42
MED17-208	ENST00000531920	DEFA5	Q01523	94 aa		-0.07	□□□□□ -2.42
MED17-208	ENST00000531920	ANKAR	Q7Z5J8	1434 aa		-0.07	□□□□□ -2.42
MED17-208	ENST00000531920	ABCA8	O94911	1581 aa		-0.07	□□□□□ -2.42
MED17-208	ENST00000531920	MAP3K1	Q13233	1512 aa		-0.08	□□□□□ -2.42
MED17-208	ENST00000531920	FLNA	P21333	2647 aa	Known RBP	-0.08	□□□□□ -2.42
MED17-208	ENST00000531920	LINC00158	P58513	81 aa		-0.08	□□□□□ -2.42
MED17-208	ENST00000531920	LRP2	P98164	4655 aa		-0.08	□□□□□ -2.42
MED17-208	ENST00000531920	LRRIQ1	Q96JM4	1722 aa		-0.09	□□□□□ -2.42
MED17-208	ENST00000531920	C3orf79	P0CE67	100 aa		-0.09	□□□□□ -2.42
MED17-208	ENST00000531920	FLNB	O75369	2602 aa	Known RBP	-0.1	□□□□□ -2.42
MED17-208	ENST00000531920	HMGA1	P17096	107 aa	Known RBP	-0.1	□□□□□ -2.43
MED17-208	ENST00000531920	ACAN	P16112	2415 aa		-0.11	□□□□□ -2.43
MED17-208	ENST00000531920	LRP1B	Q9NZR2	4599 aa		-0.11	□□□□□ -2.43
MED17-208	ENST00000531920		H0YGG7	62 aa		-0.12	□□□□□ -2.43
MED17-208	ENST00000531920	PLXNC1	O60486	1568 aa		-0.12	□□□□□ -2.43
MED17-208	ENST00000531920	MYO5C	Q9NQX4	1742 aa		-0.13	□□□□□ -2.43
MED17-208	ENST00000531920	CD163L1	Q9NR16	1453 aa		-0.13	□□□□□ -2.43
MED17-208	ENST00000531920	WIZ	O95785	1651 aa		-0.14	□□□□□ -2.43
MED17-208	ENST00000531920	ZAN	Q9Y493	2812 aa		-0.14	□□□□□ -2.43
MED17-208	ENST00000531920		H3BVH4	76 aa		-0.14	□□□□□ -2.43
MED17-208	ENST00000531920	PCNX1	Q96RV3	2341 aa		-0.14	□□□□□ -2.43
MED17-208	ENST00000531920	IQGAP3	Q86VI3	1631 aa		-0.15	□□□□□ -2.43
MED17-208	ENST00000531920		H0YAA0	97 aa		-0.15	□□□□□ -2.43
MED17-208	ENST00000531920	ANKRD50	Q9ULJ7	1429 aa		-0.15	□□□□□ -2.43
MED17-208	ENST00000531920	TJP1	Q07157	1748 aa		-0.16	□□□□□ -2.43
MED17-208	ENST00000531920	EIF2AK4	Q9P2K8	1649 aa	Known RBP	-0.16	□□□□□ -2.43
MED17-208	ENST00000531920	LMTK2	Q8IWU2	1503 aa		-0.16	□□□□□ -2.43
MED17-208	ENST00000531920	PDE4DIP	Q5VU43	2346 aa		-0.16	□□□□□ -2.43
MED17-208	ENST00000531920	COL6A3	P12111	3177 aa		-0.16	□□□□□ -2.44
MED17-208	ENST00000531920	TRANK1	O15050	2925 aa		-0.16	□□□□□ -2.44
MED17-208	ENST00000531920	MUC2	Q02817	5179 aa		-0.17	□□□□□ -2.44

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