RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.74	■■□□□ 1.39
MED17-208	ENST00000531920	CHIC1	Q5VXU3	224 aa		22.06	■■□□□ 1.12
MED17-208	ENST00000531920	SENP3	Q9H4L4	574 aa	Predicted RBP	20.25	■□□□□ 0.83
MED17-208	ENST00000531920	PHF23	Q9BUL5	403 aa	Predicted RBP	19.95	■□□□□ 0.78
MED17-208	ENST00000531920	FOXD1	Q16676	465 aa		19.01	■□□□□ 0.63
MED17-208	ENST00000531920	POTED	Q86YR6	584 aa		18.57	■□□□□ 0.56
MED17-208	ENST00000531920	MSH5	O43196	834 aa		17.95	■□□□□ 0.46
MED17-208	ENST00000531920	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.53	■□□□□ 0.4
MED17-208	ENST00000531920	PPP6R1	Q9UPN7	881 aa		17.37	■□□□□ 0.37
MED17-208	ENST00000531920	PLPPR3	Q6T4P5	718 aa		17.22	■□□□□ 0.35
MED17-208	ENST00000531920	ADRA2B	P18089	450 aa		17.21	■□□□□ 0.35
MED17-208	ENST00000531920	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.01	■□□□□ 0.15
MED17-208	ENST00000531920	DMRT2	Q9Y5R5	561 aa		16.01	■□□□□ 0.15
MED17-208	ENST00000531920	CACNB1	Q02641	598 aa	Predicted RBP	15.73	■□□□□ 0.11
MED17-208	ENST00000531920	SCAF1	Q9H7N4	1312 aa	Known RBP	15.69	■□□□□ 0.1
MED17-208	ENST00000531920	RNF39	Q9H2S5	420 aa		15.32	■□□□□ 0.04
MED17-208	ENST00000531920	DCAF8L1	A6NGE4	600 aa		15.23	■□□□□ 0.03
MED17-208	ENST00000531920	HOXD11	P31277	338 aa	Predicted RBP	15.23	■□□□□ 0.03
MED17-208	ENST00000531920	C1QBP	Q07021	282 aa	Known RBP	15.03	■□□□□ -0
MED17-208	ENST00000531920	PPP4R3CP	Q6ZMV5	832 aa		15.03	■□□□□ -0
MED17-208	ENST00000531920	RNF216	Q9NWF9	866 aa	Predicted RBP	14.91	□□□□□ -0.02
MED17-208	ENST00000531920	CNKSR2	Q8WXI2	1034 aa		14.88	□□□□□ -0.03
MED17-208	ENST00000531920	DNAJC5B	Q9UF47	199 aa		14.85	□□□□□ -0.03
MED17-208	ENST00000531920	POTEH	Q6S545	545 aa		14.41	□□□□□ -0.1
MED17-208	ENST00000531920	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.38	□□□□□ -0.11
MED17-208	ENST00000531920	NCBP3	Q53F19	620 aa	Known RBP	14.21	□□□□□ -0.13
MED17-208	ENST00000531920	DSG3	P32926	999 aa		14.14	□□□□□ -0.15
MED17-208	ENST00000531920		U3KPZ7	1027 aa	Predicted RBP	14.1	□□□□□ -0.15
MED17-208	ENST00000531920	NPM3	O75607	178 aa	Known RBP	14.09	□□□□□ -0.15
MED17-208	ENST00000531920	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.06	□□□□□ -0.16
MED17-208	ENST00000531920	CAPN15	O75808	1086 aa		13.98	□□□□□ -0.17
MED17-208	ENST00000531920	SLC4A2	P04920	1241 aa		13.65	□□□□□ -0.22
MED17-208	ENST00000531920	ABCB7	O75027	752 aa		13.62	□□□□□ -0.23
MED17-208	ENST00000531920	TRH	P20396	242 aa	Predicted RBP	13.62	□□□□□ -0.23
MED17-208	ENST00000531920	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.59	□□□□□ -0.23
MED17-208	ENST00000531920	APLP2	Q06481	763 aa		13.53	□□□□□ -0.24
MED17-208	ENST00000531920	RBM42	Q9BTD8	480 aa	Known RBP	13.42	□□□□□ -0.26
MED17-208	ENST00000531920	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.41	□□□□□ -0.26
MED17-208	ENST00000531920	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.41	□□□□□ -0.26
MED17-208	ENST00000531920	CHRDL2	Q6WN34	429 aa		13.4	□□□□□ -0.26
MED17-208	ENST00000531920	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.32	□□□□□ -0.28
MED17-208	ENST00000531920	KCNA4	P22459	653 aa		13.28	□□□□□ -0.28
MED17-208	ENST00000531920	SP7	Q8TDD2	431 aa	Predicted RBP	13.22	□□□□□ -0.29
MED17-208	ENST00000531920	POLA2	Q14181	598 aa		13.18	□□□□□ -0.3
MED17-208	ENST00000531920	AKT1S1	Q96B36	256 aa		13.04	□□□□□ -0.32
MED17-208	ENST00000531920	MYCN	P04198	464 aa	Predicted RBP	12.99	□□□□□ -0.33
MED17-208	ENST00000531920	PIP4P2	Q8N4L2	257 aa		12.98	□□□□□ -0.33
MED17-208	ENST00000531920	REM2	Q8IYK8	340 aa	Predicted RBP	12.93	□□□□□ -0.34
MED17-208	ENST00000531920	FXR2	P51116	673 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
MED17-208	ENST00000531920	HAX1	O00165	279 aa		12.84	□□□□□ -0.35
MED17-208	ENST00000531920	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.82	□□□□□ -0.36
MED17-208	ENST00000531920	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.81	□□□□□ -0.36
MED17-208	ENST00000531920	PITPNM1	O00562	1244 aa		12.79	□□□□□ -0.36
MED17-208	ENST00000531920	EVX2	Q03828	476 aa		12.76	□□□□□ -0.37
MED17-208	ENST00000531920	OSCAR	Q8IYS5	282 aa		12.74	□□□□□ -0.37
MED17-208	ENST00000531920	EHMT2	Q96KQ7	1210 aa		12.71	□□□□□ -0.37
MED17-208	ENST00000531920	FOXD4L1	Q9NU39	408 aa		12.54	□□□□□ -0.4
MED17-208	ENST00000531920	C19orf67	A6NJJ6	358 aa		12.45	□□□□□ -0.42
MED17-208	ENST00000531920	PRKAR2A	P13861	404 aa	Known RBP	12.42	□□□□□ -0.42
MED17-208	ENST00000531920	SPDYE2B	A6NHP3	402 aa		12.41	□□□□□ -0.42
MED17-208	ENST00000531920	SPDYE6	P0CI01	402 aa		12.41	□□□□□ -0.42
MED17-208	ENST00000531920	SPDYE2	Q495Y8	402 aa		12.41	□□□□□ -0.42
MED17-208	ENST00000531920	GABBR2	O75899	941 aa		12.4	□□□□□ -0.42
MED17-208	ENST00000531920	LHX8	Q68G74	356 aa		12.4	□□□□□ -0.42
MED17-208	ENST00000531920	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.37	□□□□□ -0.43
MED17-208	ENST00000531920	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.31	□□□□□ -0.44
MED17-208	ENST00000531920	CLEC11A	Q9Y240	323 aa		12.28	□□□□□ -0.44
MED17-208	ENST00000531920	ATXN8OS	P0DMR3	200 aa		12.26	□□□□□ -0.45
MED17-208	ENST00000531920	ZBTB22	O15209	634 aa		12.24	□□□□□ -0.45
MED17-208	ENST00000531920	FBLN2	P98095	1184 aa		12.23	□□□□□ -0.45
MED17-208	ENST00000531920	CSRNP3	Q8WYN3	585 aa		12.22	□□□□□ -0.45
MED17-208	ENST00000531920	SSUH2	Q9Y2M2	353 aa		12.22	□□□□□ -0.45
MED17-208	ENST00000531920	MKRN4P	Q13434	485 aa	Predicted RBP	12.2	□□□□□ -0.46
MED17-208	ENST00000531920	POTEI	P0CG38	1075 aa		12.18	□□□□□ -0.46
MED17-208	ENST00000531920	CHADL	Q6NUI6	762 aa		12.17	□□□□□ -0.46
MED17-208	ENST00000531920	ZNF692	Q9BU19	519 aa	Predicted RBP	12.14	□□□□□ -0.47
MED17-208	ENST00000531920	PRR29	P0C7W0	189 aa		12.02	□□□□□ -0.49
MED17-208	ENST00000531920	CLCN6	P51797	869 aa		11.99	□□□□□ -0.49
MED17-208	ENST00000531920	PLSCR2	Q9NRY7	297 aa		11.99	□□□□□ -0.49
MED17-208	ENST00000531920	CD44	P16070	742 aa	Known RBP	11.98	□□□□□ -0.49
MED17-208	ENST00000531920	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
MED17-208	ENST00000531920	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.94	□□□□□ -0.5
MED17-208	ENST00000531920	DCBLD2	Q96PD2	775 aa		11.84	□□□□□ -0.51
MED17-208	ENST00000531920	ZNF579	Q8NAF0	562 aa	Known RBP	11.81	□□□□□ -0.52
MED17-208	ENST00000531920	OTUD5	Q96G74	571 aa		11.81	□□□□□ -0.52
MED17-208	ENST00000531920	POTEB2	H3BUK9	544 aa		11.76	□□□□□ -0.53
MED17-208	ENST00000531920	ZRANB1	Q9UGI0	708 aa		11.72	□□□□□ -0.53
MED17-208	ENST00000531920	GALR2	O43603	387 aa	Predicted RBP	11.7	□□□□□ -0.54
MED17-208	ENST00000531920	POTEM	A6NI47	508 aa		11.67	□□□□□ -0.54
MED17-208	ENST00000531920	CREBZF	Q9NS37	354 aa		11.66	□□□□□ -0.54
MED17-208	ENST00000531920	POTEG	Q6S5H5	508 aa		11.63	□□□□□ -0.55
MED17-208	ENST00000531920	PELP1	Q8IZL8	1130 aa	Known RBP	11.59	□□□□□ -0.55
MED17-208	ENST00000531920	PCDH10	Q9P2E7	1040 aa		11.56	□□□□□ -0.56
MED17-208	ENST00000531920	POTEJ	P0CG39	1038 aa		11.52	□□□□□ -0.57
MED17-208	ENST00000531920	PHF12	Q96QT6	1004 aa		11.52	□□□□□ -0.57
MED17-208	ENST00000531920	STAG3	Q9UJ98	1225 aa		11.49	□□□□□ -0.57
MED17-208	ENST00000531920	LCE2D	Q5TA82	110 aa	Predicted RBP	11.46	□□□□□ -0.57
MED17-208	ENST00000531920	ASTL	Q6HA08	431 aa	Predicted RBP	11.46	□□□□□ -0.57
MED17-208	ENST00000531920	MNX1	P50219	401 aa	Predicted RBP	11.45	□□□□□ -0.58
MED17-208	ENST00000531920	PAK3	O75914	559 aa	Predicted RBP	11.43	□□□□□ -0.58

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