RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 MUC5ACP98088 5654 aa0.15□□□□□ -2.38
SCARNA15.2-201ENST00000516409 UMAD1C9J7I0 102 aa0.15□□□□□ -2.39
SCARNA15.2-201ENST00000516409 NDUFA3O95167 84 aa0.15□□□□□ -2.39
SCARNA15.2-201ENST00000516409 SMIM13P0DJ93 91 aa0.15□□□□□ -2.39
SCARNA15.2-201ENST00000516409 SPTA1P02549 2419 aa0.15□□□□□ -2.39
SCARNA15.2-201ENST00000516409 HSPG2P98160 4391 aa0.14□□□□□ -2.39
SCARNA15.2-201ENST00000516409 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
SCARNA15.2-201ENST00000516409 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 ATP5EP2Q5VTU8 51 aa0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 C18orf32Q8TCD1 76 aa0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 PREX1Q8TCU6 1659 aa0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 LTN1O94822 1766 aa0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 POLR1AO95602 1720 aaPredicted RBP0.13□□□□□ -2.39
SCARNA15.2-201ENST00000516409 M0R2T5 61 aa0.12□□□□□ -2.39
SCARNA15.2-201ENST00000516409 SPRR2DP22532 72 aa0.12□□□□□ -2.39
SCARNA15.2-201ENST00000516409 IFI27P40305 119 aaPredicted RBP0.12□□□□□ -2.39
SCARNA15.2-201ENST00000516409 DOT1LQ8TEK3 1739 aa0.12□□□□□ -2.39
SCARNA15.2-201ENST00000516409 KDM5DQ9BY66 1539 aa0.12□□□□□ -2.39
SCARNA15.2-201ENST00000516409 CEP170BQ9Y4F5 1589 aaPredicted RBP0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 NREPQ16612 68 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 SCRIBQ14160 1630 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 CHD8Q9HCK8 2581 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 ABCC1P33527 1531 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 REV3LO60673 3130 aa0.11□□□□□ -2.39
SCARNA15.2-201ENST00000516409 COX6B2Q6YFQ2 88 aa0.1□□□□□ -2.39
SCARNA15.2-201ENST00000516409 RRBP1Q9P2E9 1410 aaKnown RBP0.1□□□□□ -2.39
SCARNA15.2-201ENST00000516409 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.39
SCARNA15.2-201ENST00000516409 RGPD5Q99666 1765 aa0.09□□□□□ -2.39
SCARNA15.2-201ENST00000516409 EP300Q09472 2414 aaPredicted RBP0.08□□□□□ -2.4
SCARNA15.2-201ENST00000516409 MAGI3Q5TCQ9 1506 aa0.08□□□□□ -2.4
SCARNA15.2-201ENST00000516409 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
SCARNA15.2-201ENST00000516409 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
SCARNA15.2-201ENST00000516409 NWD1Q149M9 1564 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 ARFGEF2Q9Y6D5 1785 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 ANKARQ7Z5J8 1434 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 LCE6AA0A183 80 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 NDUFA4O00483 81 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 HMGA1P17096 107 aaKnown RBP0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 DEFB135Q30KP9 77 aa0.07□□□□□ -2.4
SCARNA15.2-201ENST00000516409 CFAP74Q9C0B2 1584 aa0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 CNOT1A5YKK6 2376 aaKnown RBP0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 TNRC6CQ9HCJ0 1690 aaKnown RBP0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 FLNCQ14315 2725 aa0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 PRO3102Q9H379 93 aa0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 LRP2P98164 4655 aa0.06□□□□□ -2.4
SCARNA15.2-201ENST00000516409 WNK1Q9H4A3 2382 aa0.05□□□□□ -2.4
SCARNA15.2-201ENST00000516409 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
SCARNA15.2-201ENST00000516409 TIAM2Q8IVF5 1701 aa0.04□□□□□ -2.4
SCARNA15.2-201ENST00000516409 LINC00158P58513 81 aa0.04□□□□□ -2.4
SCARNA15.2-201ENST00000516409 DEFA5Q01523 94 aa0.04□□□□□ -2.4
SCARNA15.2-201ENST00000516409 SETXQ7Z333 2677 aaKnown RBP0.04□□□□□ -2.4
SCARNA15.2-201ENST00000516409 DCHS2Q6V1P9 2916 aa0.03□□□□□ -2.4
SCARNA15.2-201ENST00000516409 H3BVH4 76 aa0.03□□□□□ -2.4
SCARNA15.2-201ENST00000516409 CCDC88BA6NC98 1476 aa0.03□□□□□ -2.41
SCARNA15.2-201ENST00000516409 NESP48681 1621 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 C4AP0C0L4 1744 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 C4BP0C0L5 1744 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 APC2O95996 2303 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 C3orf79P0CE67 100 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 CD163L1Q9NR16 1453 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 ABCA8O94911 1581 aa0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 MAP3K1Q13233 1512 aa0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 CICQ96RK0 1608 aaPredicted RBP0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 SPRR2BP35325 72 aa0□□□□□ -2.41
SCARNA15.2-201ENST00000516409 RICTORQ6R327 1708 aa0□□□□□ -2.41
SCARNA15.2-201ENST00000516409 PTPN23Q9H3S7 1636 aa0□□□□□ -2.41
SCARNA15.2-201ENST00000516409 SCN11AQ9UI33 1791 aa-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 CFAP43Q8NDM7 1665 aa-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 TRANK1O15050 2925 aa-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 SMCO4Q9NRQ5 59 aa-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 NSD1Q96L73 2696 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA15.2-201ENST00000516409 ANKRD50Q9ULJ7 1429 aa-0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 H0YAA0 97 aa-0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
SCARNA15.2-201ENST00000516409 ACANP16112 2415 aa-0.03□□□□□ -2.41
SCARNA15.2-201ENST00000516409 ENHOQ6UWT2 76 aa-0.03□□□□□ -2.41
SCARNA15.2-201ENST00000516409 HILPDAQ9Y5L2 63 aa-0.03□□□□□ -2.41
SCARNA15.2-201ENST00000516409 PDE4DIPQ5VU43 2346 aa-0.03□□□□□ -2.41
SCARNA15.2-201ENST00000516409 LRRIQ1Q96JM4 1722 aa-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 H0YGG7 62 aa-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 PDCD5O14737 125 aa-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 ADAMTS12P58397 1594 aa-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 LMTK2Q8IWU2 1503 aa-0.04□□□□□ -2.42
SCARNA15.2-201ENST00000516409 IQGAP3Q86VI3 1631 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 PCNX1Q96RV3 2341 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 AKAP13Q12802 2813 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 UGGT2Q9NYU1 1516 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 DDX60LQ5H9U9 1706 aaKnown RBP-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 MYO5CQ9NQX4 1742 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 WIZO95785 1651 aa-0.05□□□□□ -2.42
SCARNA15.2-201ENST00000516409 COL6A3P12111 3177 aa-0.06□□□□□ -2.42
SCARNA15.2-201ENST00000516409 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
SCARNA15.2-201ENST00000516409 DEFB131BA0A096LNP1 70 aa-0.06□□□□□ -2.42
SCARNA15.2-201ENST00000516409 PLXNC1O60486 1568 aa-0.06□□□□□ -2.42
SCARNA15.2-201ENST00000516409 DIP2AQ14689 1571 aa-0.06□□□□□ -2.42
SCARNA15.2-201ENST00000516409 UBL5Q9BZL1 73 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms