RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 PYY3Q5JQD4 70 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 GAFA1Q96PS6 74 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 HIGD1BQ9P298 99 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 ACANP16112 2415 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 CREBBPQ92793 2442 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 SUPT6HQ7KZ85 1726 aaKnown RBP-0.01□□□□□ -2.41
UBE2D3-218ENST00000505009 PREX1Q8TCU6 1659 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 HERC2O95714 4834 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 LRRC7Q96NW7 1537 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 ATP7BP35670 1465 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 PLIN4Q96Q06 1357 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 MYMXA0A1B0GTQ4 84 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 H0YGG7 62 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 SNRPFP62306 86 aaKnown RBP-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 C9orf62Q8N4C0 152 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 WFDC9Q8NEX5 89 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 S100A16Q96FQ6 103 aaKnown RBP-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 C20orf78Q9BR46 151 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 RABAC1Q9UI14 185 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 ALMS1Q8TCU4 4167 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 TIAM2Q8IVF5 1701 aa-0.02□□□□□ -2.41
UBE2D3-218ENST00000505009 MAGI2Q86UL8 1455 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 CNOT1A5YKK6 2376 aaKnown RBP-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 PRKDCP78527 4128 aaKnown RBP-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 LTN1O94822 1766 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 UBR1Q8IWV7 1749 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 K7EP34 96 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 NDUFB1O75438 58 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 COX6B2Q6YFQ2 88 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 MAP3K4Q9Y6R4 1608 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 HECTD4Q9Y4D8 3996 aa-0.03□□□□□ -2.41
UBE2D3-218ENST00000505009 PPLO60437 1756 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 KIF14Q15058 1648 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 KANTRA0A1W2PQU2 76 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 CEBPZOSA8MTT3 80 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 ACYP1P07311 99 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 LINC00643Q86TS7 51 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 PDZD2O15018 2839 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 TENM2Q9NT68 2774 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 NEXMIFQ5QGS0 1516 aa-0.04□□□□□ -2.42
UBE2D3-218ENST00000505009 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 BIRC6Q9NR09 4857 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 RGPD1P0DJD0 1748 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 UACAQ9BZF9 1416 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.05□□□□□ -2.424e-7■■■□□ 18
UBE2D3-218ENST00000505009 PCNX1Q96RV3 2341 aa-0.05□□□□□ -2.42
UBE2D3-218ENST00000505009 RIF1Q5UIP0 2472 aaKnown RBP-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 NBEAL1Q6ZS30 2694 aa-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 URB2Q14146 1524 aaKnown RBP-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 MAP1AP78559 2803 aaPredicted RBP-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 POLR1AO95602 1720 aaPredicted RBP-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 TRAV21A0A0B4J279 112 aa-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 GNG2P59768 71 aa-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 LRP2P98164 4655 aa-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 HECTD1Q9ULT8 2610 aa-0.06□□□□□ -2.42
UBE2D3-218ENST00000505009 KNL1Q8NG31 2342 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 C4AP0C0L4 1744 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 C4BP0C0L5 1744 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 C3orf79P0CE67 100 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 IFI27P40305 119 aaPredicted RBP-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 PRO3102Q9H379 93 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 NESP48681 1621 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 NWD1Q149M9 1564 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 RB1CC1Q8TDY2 1594 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 SRRM2Q9UQ35 2752 aaKnown RBP-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 DNHD1Q96M86 4753 aa-0.07□□□□□ -2.42
UBE2D3-218ENST00000505009 PDE4DIPQ5VU43 2346 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 TMEM131LA2VDJ0 1609 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 PIK3C2BO00750 1634 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 TRANK1O15050 2925 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 CICQ96RK0 1608 aaPredicted RBP-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 A0A087WXM4 84 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 UMAD1C9J7I0 102 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 NDUFA3O95167 84 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 ADIRFQ15847 76 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 LELP1Q5T871 98 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 ATP5EP2Q5VTU8 51 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 S100A13Q99584 98 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 LAMA3Q16787 3333 aa-0.08□□□□□ -2.42
UBE2D3-218ENST00000505009 FASNP49327 2511 aaKnown RBP-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 CCDC88BA6NC98 1476 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 SMARCA2P51531 1590 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 ADAMTS12P58397 1594 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 SETD2Q9BYW2 2564 aaPredicted RBP-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 HMGA1P17096 107 aaKnown RBP-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 MAGI3Q5TCQ9 1506 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 ARFGEF2Q9Y6D5 1785 aa-0.09□□□□□ -2.42
UBE2D3-218ENST00000505009 NCOA2Q15596 1464 aa-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 CCDC18Q5T9S5 1454 aa-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 DDX60LQ5H9U9 1706 aaKnown RBP-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 DOT1LQ8TEK3 1739 aa-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 NBASA2RRP1 2371 aa-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.1□□□□□ -2.42
UBE2D3-218ENST00000505009 SPRR2AP35326 72 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms