RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 SPTY2D1-AS1A0A0U1RR47 76 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 H3BUT2 72 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 NDUFB1O75438 58 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 PPRC1Q5VV67 1664 aaKnown RBP0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 IGF2RP11717 2491 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 HIVEP3Q5T1R4 2406 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 SPG11Q96JI7 2443 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 BOD1L1Q8NFC6 3051 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 PTPN23Q9H3S7 1636 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 BSNQ9UPA5 3926 aa0.67□□□□□ -2.3
NT5C3A-212ENST00000497542 RANBP2P49792 3224 aaKnown RBP0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 I3L3M4 83 aa0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 CFDP00746 253 aaPredicted RBP0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 SPRR1BP22528 89 aa0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 UBR3Q6ZT12 1888 aa0.66□□□□□ -2.3
NT5C3A-212ENST00000497542 RGPD2P0DJD1 1756 aa0.65□□□□□ -2.3
NT5C3A-212ENST00000497542 COL14A1Q05707 1796 aaKnown RBP0.65□□□□□ -2.3
NT5C3A-212ENST00000497542 USP9YO00507 2555 aaPredicted RBP0.65□□□□□ -2.3
NT5C3A-212ENST00000497542 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.3
NT5C3A-212ENST00000497542 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 FLNAP21333 2647 aaKnown RBP0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 COX7BP24311 80 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 SPRR1AP35321 89 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 GAFA1Q96PS6 74 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 TSC2P49815 1807 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 NCOA2Q15596 1464 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 SPTBN5Q9NRC6 3674 aaKnown RBP0.65□□□□□ -2.31
NT5C3A-212ENST00000497542 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 FMN2Q9NZ56 1722 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 HERC2O95714 4834 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 DEFB109BQ30KR1 87 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 EP400Q96L91 3159 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 REV3LO60673 3130 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 PDZD2O15018 2839 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 PIK3C2BO00750 1634 aa0.64□□□□□ -2.31
NT5C3A-212ENST00000497542 CSMD1Q96PZ7 3565 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 RELNP78509 3460 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 CPSF4LA6NMK7 179 aaKnown RBP0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 RPL38P63173 70 aaKnown RBP0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 C18orf32Q8TCD1 76 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 USP32Q8NFA0 1604 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 MAGI3Q5TCQ9 1506 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 CLIP1P30622 1438 aa0.63□□□□□ -2.31
NT5C3A-212ENST00000497542 RGPD8O14715 1765 aaPredicted RBP0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 LTN1O94822 1766 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 RGPD5Q99666 1765 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 FLNCQ14315 2725 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 AKAP13Q12802 2813 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 ITPR1Q14643 2758 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 UNC80Q8N2C7 3258 aa0.62□□□□□ -2.31
NT5C3A-212ENST00000497542 KMT2DO14686 5537 aa0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 CCL22O00626 93 aa0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 WFDC9Q8NEX5 89 aa0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 MRPL34Q9BQ48 92 aaKnown RBP0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 ABCA8O94911 1581 aa0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 POLR1AO95602 1720 aaPredicted RBP0.61□□□□□ -2.31
NT5C3A-212ENST00000497542 CFAP46Q8IYW2 2715 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 UBR5O95071 2799 aaPredicted RBP0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 SPEGQ15772 3267 aa0.6□□□□□ -2.31
NT5C3A-212ENST00000497542 ATRQ13535 2644 aa0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 CEP295Q9C0D2 2601 aa0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 ACACBO00763 2458 aa0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 MKI67P46013 3256 aaKnown RBP0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 DEFB105AQ8NG35 78 aa0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 U3KQA8 63 aa0.59□□□□□ -2.31
NT5C3A-212ENST00000497542 BCORQ6W2J9 1755 aa0.59□□□□□ -2.32
NT5C3A-212ENST00000497542 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.32
NT5C3A-212ENST00000497542 CCDC88BA6NC98 1476 aa0.59□□□□□ -2.32
NT5C3A-212ENST00000497542 NBEAL1Q6ZS30 2694 aa0.59□□□□□ -2.32
NT5C3A-212ENST00000497542 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
NT5C3A-212ENST00000497542 TIAM2Q8IVF5 1701 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 HMCN2Q8NDA2 5059 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 SPINK4O60575 86 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 ZNF831Q5JPB2 1677 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 OTOGQ6ZRI0 2925 aa0.58□□□□□ -2.32
NT5C3A-212ENST00000497542 SCN11AQ9UI33 1791 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 CNOT1A5YKK6 2376 aaKnown RBP0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 CEP250Q9BV73 2442 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 NESP48681 1621 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 PREX1Q8TCU6 1659 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 UMAD1C9J7I0 102 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 IFI27P40305 119 aaPredicted RBP0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 SPTA1P02549 2419 aa0.57□□□□□ -2.32
NT5C3A-212ENST00000497542 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 ARFGEF2Q9Y6D5 1785 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 A0A087WXM4 84 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms