RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
NT5C3A-212ENST00000497542 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
NT5C3A-212ENST00000497542 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
NT5C3A-212ENST00000497542 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
NT5C3A-212ENST00000497542 FOXD1Q16676 465 aa19.14■□□□□ 0.65
NT5C3A-212ENST00000497542 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
NT5C3A-212ENST00000497542 MSH5O43196 834 aa18.12■□□□□ 0.49
NT5C3A-212ENST00000497542 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
NT5C3A-212ENST00000497542 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
NT5C3A-212ENST00000497542 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
NT5C3A-212ENST00000497542 ADRA2BP18089 450 aa17.53■□□□□ 0.4
NT5C3A-212ENST00000497542 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
NT5C3A-212ENST00000497542 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
NT5C3A-212ENST00000497542 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
NT5C3A-212ENST00000497542 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
NT5C3A-212ENST00000497542 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
NT5C3A-212ENST00000497542 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
NT5C3A-212ENST00000497542 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
NT5C3A-212ENST00000497542 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
NT5C3A-212ENST00000497542 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
NT5C3A-212ENST00000497542 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
NT5C3A-212ENST00000497542 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
NT5C3A-212ENST00000497542 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
NT5C3A-212ENST00000497542 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
NT5C3A-212ENST00000497542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
NT5C3A-212ENST00000497542 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
NT5C3A-212ENST00000497542 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
NT5C3A-212ENST00000497542 CAPN15O75808 1086 aa14.29□□□□□ -0.12
NT5C3A-212ENST00000497542 DSG3P32926 999 aa14.29□□□□□ -0.12
NT5C3A-212ENST00000497542 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
NT5C3A-212ENST00000497542 POTEHQ6S545 545 aa14.19□□□□□ -0.14
NT5C3A-212ENST00000497542 APLP2Q06481 763 aa14.07□□□□□ -0.16
NT5C3A-212ENST00000497542 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
NT5C3A-212ENST00000497542 KCNA4P22459 653 aa14.04□□□□□ -0.16
NT5C3A-212ENST00000497542 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
NT5C3A-212ENST00000497542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
NT5C3A-212ENST00000497542 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
NT5C3A-212ENST00000497542 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
NT5C3A-212ENST00000497542 ABCB7O75027 752 aa13.9□□□□□ -0.18
NT5C3A-212ENST00000497542 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
NT5C3A-212ENST00000497542 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
NT5C3A-212ENST00000497542 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
NT5C3A-212ENST00000497542 POLA2Q14181 598 aa13.52□□□□□ -0.25
NT5C3A-212ENST00000497542 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
NT5C3A-212ENST00000497542 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
NT5C3A-212ENST00000497542 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
NT5C3A-212ENST00000497542 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
NT5C3A-212ENST00000497542 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
NT5C3A-212ENST00000497542 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
NT5C3A-212ENST00000497542 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
NT5C3A-212ENST00000497542 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
NT5C3A-212ENST00000497542 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
NT5C3A-212ENST00000497542 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
NT5C3A-212ENST00000497542 PITPNM1O00562 1244 aa13□□□□□ -0.33
NT5C3A-212ENST00000497542 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
NT5C3A-212ENST00000497542 HAX1O00165 279 aa12.93□□□□□ -0.34
NT5C3A-212ENST00000497542 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
NT5C3A-212ENST00000497542 ZBTB22O15209 634 aa12.9□□□□□ -0.34
NT5C3A-212ENST00000497542 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
NT5C3A-212ENST00000497542 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
NT5C3A-212ENST00000497542 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
NT5C3A-212ENST00000497542 FBLN2P98095 1184 aa12.81□□□□□ -0.36
NT5C3A-212ENST00000497542 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
NT5C3A-212ENST00000497542 EVX2Q03828 476 aa12.69□□□□□ -0.38
NT5C3A-212ENST00000497542 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
NT5C3A-212ENST00000497542 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
NT5C3A-212ENST00000497542 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
NT5C3A-212ENST00000497542 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
NT5C3A-212ENST00000497542 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
NT5C3A-212ENST00000497542 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
NT5C3A-212ENST00000497542 GABBR2O75899 941 aa12.44□□□□□ -0.42
NT5C3A-212ENST00000497542 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
NT5C3A-212ENST00000497542 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
NT5C3A-212ENST00000497542 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
NT5C3A-212ENST00000497542 LHX8Q68G74 356 aa12.32□□□□□ -0.44
NT5C3A-212ENST00000497542 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
NT5C3A-212ENST00000497542 CLCN6P51797 869 aa12.24□□□□□ -0.45
NT5C3A-212ENST00000497542 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
NT5C3A-212ENST00000497542 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
NT5C3A-212ENST00000497542 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
NT5C3A-212ENST00000497542 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
NT5C3A-212ENST00000497542 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
NT5C3A-212ENST00000497542 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
NT5C3A-212ENST00000497542 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
NT5C3A-212ENST00000497542 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
NT5C3A-212ENST00000497542 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
NT5C3A-212ENST00000497542 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
NT5C3A-212ENST00000497542 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
NT5C3A-212ENST00000497542 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
NT5C3A-212ENST00000497542 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
NT5C3A-212ENST00000497542 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
NT5C3A-212ENST00000497542 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
NT5C3A-212ENST00000497542 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
NT5C3A-212ENST00000497542 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
NT5C3A-212ENST00000497542 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
NT5C3A-212ENST00000497542 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
NT5C3A-212ENST00000497542 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
NT5C3A-212ENST00000497542 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
NT5C3A-212ENST00000497542 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
NT5C3A-212ENST00000497542 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms