RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 NCOR1O75376 2440 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 NDUFB1O75438 58 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 MEGF8Q7Z7M0 2845 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 CPS1P31327 1500 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 EIF2AK4Q9P2K8 1649 aaKnown RBP0.68□□□□□ -2.3
LRIF1-203ENST00000494675 AKAP6Q13023 2319 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 PDE4DIPQ5VU43 2346 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 TRANK1O15050 2925 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 IGF2RP11717 2491 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 DSPP15924 2871 aaKnown RBP0.68□□□□□ -2.3
LRIF1-203ENST00000494675 CLASP1Q7Z460 1538 aa0.68□□□□□ -2.3
LRIF1-203ENST00000494675 BDP1A6H8Y1 2624 aa0.67□□□□□ -2.3
LRIF1-203ENST00000494675 A0A0G2JMZ2 1700 aa0.67□□□□□ -2.3
LRIF1-203ENST00000494675 DDX60LQ5H9U9 1706 aaKnown RBP0.67□□□□□ -2.3
LRIF1-203ENST00000494675 FSIP2Q5CZC0 6907 aa0.67□□□□□ -2.3
LRIF1-203ENST00000494675 TULP4Q9NRJ4 1543 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 ATRQ13535 2644 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 SPTY2D1-AS1A0A0U1RR47 76 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 I3L2K1 104 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
LRIF1-203ENST00000494675 SPTA1P02549 2419 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 WNK2Q9Y3S1 2297 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 LCE6AA0A183 80 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 LOC730098B7Z3J9 87 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 K7EQZ3 153 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 M0R1W7 72 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 UBL5Q9BZL1 73 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 TP53AIP1Q9HCN2 124 aa0.66□□□□□ -2.3
LRIF1-203ENST00000494675 TPRP12270 2363 aaKnown RBP0.65□□□□□ -2.3
LRIF1-203ENST00000494675 CHD6Q8TD26 2715 aa0.65□□□□□ -2.31
LRIF1-203ENST00000494675 CROCC2H7BZ55 1655 aa0.65□□□□□ -2.31
LRIF1-203ENST00000494675 CPSF4LA6NMK7 179 aaKnown RBP0.65□□□□□ -2.31
LRIF1-203ENST00000494675 PRO0255Q9UI72 69 aa0.65□□□□□ -2.31
LRIF1-203ENST00000494675 NWD1Q149M9 1564 aa0.65□□□□□ -2.31
LRIF1-203ENST00000494675 LY75O60449 1722 aa0.65□□□□□ -2.31
LRIF1-203ENST00000494675 A0A0D9SG42 100 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 PRO3102Q9H379 93 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 TIMM8BQ9Y5J9 83 aaPredicted RBP0.64□□□□□ -2.31
LRIF1-203ENST00000494675 LRRC37AA6NMS7 1700 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 TOGARAM1Q9Y4F4 1720 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 TNRC6CQ9HCJ0 1690 aaKnown RBP0.64□□□□□ -2.31
LRIF1-203ENST00000494675 CSPG4Q6UVK1 2322 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 PIN1P1O15428 100 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 NDUFA3O95167 84 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 CRIP1P50238 77 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 KLK9Q2XQG4 91 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 APLNQ9ULZ1 77 aa0.64□□□□□ -2.31
LRIF1-203ENST00000494675 ABCC6O95255 1503 aa0.63□□□□□ -2.31
LRIF1-203ENST00000494675 COX6A2Q02221 97 aa0.63□□□□□ -2.31
LRIF1-203ENST00000494675 CNFNQ9BYD5 112 aa0.63□□□□□ -2.31
LRIF1-203ENST00000494675 ANKRD50Q9ULJ7 1429 aa0.63□□□□□ -2.31
LRIF1-203ENST00000494675 FBN2P35556 2912 aa0.63□□□□□ -2.31
LRIF1-203ENST00000494675 TOP2AP11388 1531 aaKnown RBP0.63□□□□□ -2.31
LRIF1-203ENST00000494675 ABCA2Q9BZC7 2435 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 I3L3M4 83 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 PRH1P02810 166 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 MRPL34Q9BQ48 92 aaKnown RBP0.62□□□□□ -2.31
LRIF1-203ENST00000494675 C4AP0C0L4 1744 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 C4BP0C0L5 1744 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 APCP25054 2843 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 ABCA5Q8WWZ7 1642 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
LRIF1-203ENST00000494675 MAST1Q9Y2H9 1570 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 RPL38P63173 70 aaKnown RBP0.62□□□□□ -2.31
LRIF1-203ENST00000494675 PIGYQ3MUY2 71 aa0.62□□□□□ -2.31
LRIF1-203ENST00000494675 FANCD2Q9BXW9 1451 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 AKAP13Q12802 2813 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 CREBBPQ92793 2442 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 SPINK9Q5DT21 86 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 CDKN2A-AS1Q9UH64 79 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 AGLP35573 1532 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 SYCP2Q9BX26 1530 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 BIVM-ERCC5R4GMW8 1640 aa0.61□□□□□ -2.31
LRIF1-203ENST00000494675 EFCAB6Q5THR3 1501 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 ETDCA0A1B0GVM5 59 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 SNRPGP15A8MWD9 76 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 SPRR1AP35321 89 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 FXYD6P3P58550 94 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 Q8IZM0 81 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 DEFB123Q8N688 67 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 KCNQ1DNQ9H478 68 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 C3P01024 1663 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 SPINK4O60575 86 aa0.6□□□□□ -2.31
LRIF1-203ENST00000494675 NBASA2RRP1 2371 aa0.59□□□□□ -2.31
LRIF1-203ENST00000494675 MAP1BP46821 2468 aaKnown RBP0.59□□□□□ -2.31
LRIF1-203ENST00000494675 CELSR1Q9NYQ6 3014 aa0.59□□□□□ -2.31
LRIF1-203ENST00000494675 PCNX1Q96RV3 2341 aa0.59□□□□□ -2.32
LRIF1-203ENST00000494675 CHD8Q9HCK8 2581 aa0.59□□□□□ -2.32
LRIF1-203ENST00000494675 CEP290O15078 2479 aa0.59□□□□□ -2.32
LRIF1-203ENST00000494675 ANK2Q01484 3957 aa0.59□□□□□ -2.32
LRIF1-203ENST00000494675 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.32
LRIF1-203ENST00000494675 H0YAA0 97 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 TOMM5Q8N4H5 51 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 DEFB105AQ8NG35 78 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms