RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PSMB2P49721 201 aa6.41□□□□□ -1.38
TTC28-207ENST00000490475 GAGE2EQ4V326 116 aa6.41□□□□□ -1.38
TTC28-207ENST00000490475 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
TTC28-207ENST00000490475 GAGE2DQ9UEU5 116 aa6.41□□□□□ -1.38
TTC28-207ENST00000490475 COX6CP09669 75 aa6.4□□□□□ -1.38
TTC28-207ENST00000490475 SCGB1C2P0DMR2 95 aa6.4□□□□□ -1.38
TTC28-207ENST00000490475 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
TTC28-207ENST00000490475 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
TTC28-207ENST00000490475 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
TTC28-207ENST00000490475 UBR4Q5T4S7 5183 aa6.4□□□□□ -1.39
TTC28-207ENST00000490475 FAM168BA1KXE4 195 aa6.39□□□□□ -1.39
TTC28-207ENST00000490475 A4D1N5 150 aa6.39□□□□□ -1.39
TTC28-207ENST00000490475 TCL1BO95988 128 aa6.39□□□□□ -1.39
TTC28-207ENST00000490475 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
TTC28-207ENST00000490475 RPL13AP40429 203 aaKnown RBP6.39□□□□□ -1.39
TTC28-207ENST00000490475 TSPEAR-AS2P59090 65 aa6.39□□□□□ -1.39
TTC28-207ENST00000490475 IGLV5-39A0A0G2JS06 123 aa6.38□□□□□ -1.39
TTC28-207ENST00000490475 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
TTC28-207ENST00000490475 SLC25A20O43772 301 aa6.38□□□□□ -1.39
TTC28-207ENST00000490475 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
TTC28-207ENST00000490475 PSORS1C2Q9UIG4 136 aa6.38□□□□□ -1.39
TTC28-207ENST00000490475 H3BT86 120 aa6.37□□□□□ -1.39
TTC28-207ENST00000490475 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
TTC28-207ENST00000490475 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
TTC28-207ENST00000490475 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
TTC28-207ENST00000490475 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 CXCL5P42830 114 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 C1orf137Q5JT78 98 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
TTC28-207ENST00000490475 Q6Q795 121 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 LITAFQ99732 161 aa6.36□□□□□ -1.39
TTC28-207ENST00000490475 PHF5AQ7RTV0 110 aaKnown RBP6.35□□□□□ -1.39
TTC28-207ENST00000490475 FAM19A5Q7Z5A7 132 aaPredicted RBP6.35□□□□□ -1.39
TTC28-207ENST00000490475 XAGE1AQ9HD64 81 aa6.35□□□□□ -1.39
TTC28-207ENST00000490475 NDUFA12Q9UI09 145 aa6.35□□□□□ -1.39
TTC28-207ENST00000490475 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
TTC28-207ENST00000490475 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
TTC28-207ENST00000490475 C9JAW5 83 aa6.33□□□□□ -1.4
TTC28-207ENST00000490475 HERV-K104P63124 156 aa6.33□□□□□ -1.4
TTC28-207ENST00000490475 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 ACYP1P07311 99 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 PFN2P35080 140 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 Q1RN00 199 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 TNXBP22105 4242 aa6.32□□□□□ -1.4
TTC28-207ENST00000490475 H0Y9J4 135 aa6.31□□□□□ -1.4
TTC28-207ENST00000490475 UBE2BP63146 152 aa6.31□□□□□ -1.4
TTC28-207ENST00000490475 LST1O00453 97 aa6.3□□□□□ -1.4
TTC28-207ENST00000490475 TRIAP1O43715 76 aa6.3□□□□□ -1.4
TTC28-207ENST00000490475 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
TTC28-207ENST00000490475 LRP2P98164 4655 aa6.3□□□□□ -1.4
TTC28-207ENST00000490475 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
TTC28-207ENST00000490475 SNCGO76070 127 aa6.29□□□□□ -1.4
TTC28-207ENST00000490475 A0A0U1RRA0 63 aa6.28□□□□□ -1.4
TTC28-207ENST00000490475 TRACP01848 142 aa6.28□□□□□ -1.4
TTC28-207ENST00000490475 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
TTC28-207ENST00000490475 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
TTC28-207ENST00000490475 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 LINC00158P58513 81 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 COX17Q14061 63 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 ADAMTSL4-AS1Q5T5F5 129 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 SS18L2Q9UHA2 77 aa6.27□□□□□ -1.41
TTC28-207ENST00000490475 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
TTC28-207ENST00000490475 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
TTC28-207ENST00000490475 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
TTC28-207ENST00000490475 LINC00167Q96N53 147 aa6.25□□□□□ -1.41
TTC28-207ENST00000490475 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
TTC28-207ENST00000490475 RPL37AP8A6NKH3 93 aa6.24□□□□□ -1.41
TTC28-207ENST00000490475 H7C2G1 150 aa6.24□□□□□ -1.41
TTC28-207ENST00000490475 ZNF861PO60384 105 aa6.24□□□□□ -1.41
TTC28-207ENST00000490475 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
TTC28-207ENST00000490475 Q8NDZ9 215 aa6.24□□□□□ -1.41
TTC28-207ENST00000490475 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
TTC28-207ENST00000490475 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
TTC28-207ENST00000490475 TRBV7-7A0A0K0K1E9 115 aa6.23□□□□□ -1.41
TTC28-207ENST00000490475 MEIG1Q5JSS6 88 aa6.23□□□□□ -1.41
TTC28-207ENST00000490475 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 VPREB1P12018 145 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 RPL28P46779 137 aaKnown RBP6.22□□□□□ -1.41
TTC28-207ENST00000490475 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 DAND5Q8N907 189 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
TTC28-207ENST00000490475 H0YGX0 51 aa6.21□□□□□ -1.42
TTC28-207ENST00000490475 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
TTC28-207ENST00000490475 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
TTC28-207ENST00000490475 B5MCH6 92 aa6.2□□□□□ -1.42
TTC28-207ENST00000490475 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
TTC28-207ENST00000490475 BCE1O60756 84 aa6.19□□□□□ -1.42
TTC28-207ENST00000490475 LINC00643Q86TS7 51 aa6.19□□□□□ -1.42
TTC28-207ENST00000490475 A0A1B0GX51 115 aa6.18□□□□□ -1.42
TTC28-207ENST00000490475 PRR4Q16378 134 aa6.18□□□□□ -1.42
TTC28-207ENST00000490475 A0A0U1RQV1 116 aa6.17□□□□□ -1.42
TTC28-207ENST00000490475 CRYGAP11844 174 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms