RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 USP32Q8NFA0 1604 aa0.18□□□□□ -2.38
TRA2A-207ENST00000486934 NDUFA3O95167 84 aa0.18□□□□□ -2.38
TRA2A-207ENST00000486934 DEFB135Q30KP9 77 aa0.18□□□□□ -2.38
TRA2A-207ENST00000486934 ANKRD50Q9ULJ7 1429 aa0.18□□□□□ -2.38
TRA2A-207ENST00000486934 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
TRA2A-207ENST00000486934 CEP170BQ9Y4F5 1589 aaPredicted RBP0.18□□□□□ -2.38
TRA2A-207ENST00000486934 NDUFA4O00483 81 aa0.17□□□□□ -2.38
TRA2A-207ENST00000486934 MRPL33O75394 65 aaKnown RBP0.17□□□□□ -2.38
TRA2A-207ENST00000486934 CFAP74Q9C0B2 1584 aa0.17□□□□□ -2.38
TRA2A-207ENST00000486934 CSPG4Q6UVK1 2322 aa0.16□□□□□ -2.38
TRA2A-207ENST00000486934 RGPD1P0DJD0 1748 aa0.16□□□□□ -2.38
TRA2A-207ENST00000486934 NCOR1O75376 2440 aa0.16□□□□□ -2.38
TRA2A-207ENST00000486934 PIK3C2BO00750 1634 aa0.16□□□□□ -2.38
TRA2A-207ENST00000486934 PTPN23Q9H3S7 1636 aa0.15□□□□□ -2.39
TRA2A-207ENST00000486934 H0YGG7 62 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 LINC00158P58513 81 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 LELP1Q5T871 98 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 SMCO4Q9NRQ5 59 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 NWD1Q149M9 1564 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 DIP2BQ9P265 1576 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 SPTA1P02549 2419 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 CHD6Q8TD26 2715 aa0.14□□□□□ -2.39
TRA2A-207ENST00000486934 MAP3K1Q13233 1512 aa0.13□□□□□ -2.39
TRA2A-207ENST00000486934 PDCD5O14737 125 aa0.13□□□□□ -2.39
TRA2A-207ENST00000486934 SPRR2BP35325 72 aa0.13□□□□□ -2.39
TRA2A-207ENST00000486934 LTN1O94822 1766 aa0.13□□□□□ -2.39
TRA2A-207ENST00000486934 UBR5O95071 2799 aaPredicted RBP0.13□□□□□ -2.39
TRA2A-207ENST00000486934 HUWE1Q7Z6Z7 4374 aaKnown RBP0.13□□□□□ -2.39
TRA2A-207ENST00000486934 EP300Q09472 2414 aaPredicted RBP0.13□□□□□ -2.39
TRA2A-207ENST00000486934 CHD8Q9HCK8 2581 aa0.12□□□□□ -2.39
TRA2A-207ENST00000486934 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
TRA2A-207ENST00000486934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.12□□□□□ -2.394e-10■■■□□ 15.2
TRA2A-207ENST00000486934 PKD1L1Q8TDX9 2849 aa0.11□□□□□ -2.39
TRA2A-207ENST00000486934 POLR1AO95602 1720 aaPredicted RBP0.11□□□□□ -2.39
TRA2A-207ENST00000486934 TIAM2Q8IVF5 1701 aa0.11□□□□□ -2.39
TRA2A-207ENST00000486934 DEFB131BA0A096LNP1 70 aa0.11□□□□□ -2.39
TRA2A-207ENST00000486934 UBL5Q9BZL1 73 aa0.11□□□□□ -2.39
TRA2A-207ENST00000486934 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
TRA2A-207ENST00000486934 COL7A1Q02388 2944 aa0.1□□□□□ -2.39
TRA2A-207ENST00000486934 H3BVH4 76 aa0.1□□□□□ -2.39
TRA2A-207ENST00000486934 LPAP08519 4548 aa0.1□□□□□ -2.39
TRA2A-207ENST00000486934 RALGAPBQ86X10 1494 aa0.1□□□□□ -2.39
TRA2A-207ENST00000486934 BSNQ9UPA5 3926 aa0.09□□□□□ -2.39
TRA2A-207ENST00000486934 CICQ96RK0 1608 aaPredicted RBP0.09□□□□□ -2.39
TRA2A-207ENST00000486934 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.39
TRA2A-207ENST00000486934 HFM1A2PYH4 1435 aa0.09□□□□□ -2.4
TRA2A-207ENST00000486934 TNRC6CQ9HCJ0 1690 aaKnown RBP0.08□□□□□ -2.4
TRA2A-207ENST00000486934 ATRQ13535 2644 aa0.08□□□□□ -2.4
TRA2A-207ENST00000486934 ARFGEF2Q9Y6D5 1785 aa0.08□□□□□ -2.4
TRA2A-207ENST00000486934 TNXBP22105 4242 aa0.08□□□□□ -2.4
TRA2A-207ENST00000486934 CD163L1Q9NR16 1453 aa0.08□□□□□ -2.4
TRA2A-207ENST00000486934 KMT2AQ03164 3969 aa0.07□□□□□ -2.4
TRA2A-207ENST00000486934 LYNX1G3V0Z9 82 aa0.07□□□□□ -2.4
TRA2A-207ENST00000486934 ATXN8Q156A1 80 aa0.07□□□□□ -2.4
TRA2A-207ENST00000486934 KCNQ1DNQ9H478 68 aa0.07□□□□□ -2.4
TRA2A-207ENST00000486934 DOT1LQ8TEK3 1739 aa0.07□□□□□ -2.4
TRA2A-207ENST00000486934 THOC2Q8NI27 1593 aaKnown RBP0.06□□□□□ -2.4
TRA2A-207ENST00000486934 CNOT1A5YKK6 2376 aaKnown RBP0.06□□□□□ -2.4
TRA2A-207ENST00000486934 ABCA8O94911 1581 aa0.06□□□□□ -2.4
TRA2A-207ENST00000486934 DEPDC5O75140 1603 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 NESP48681 1621 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 APC2O95996 2303 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 DUOX2Q9NRD8 1548 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 DEFA5Q01523 94 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 MYCBP2O75592 4640 aa0.05□□□□□ -2.4
TRA2A-207ENST00000486934 WNK1Q9H4A3 2382 aa0.04□□□□□ -2.4
TRA2A-207ENST00000486934 LMTK2Q8IWU2 1503 aa0.04□□□□□ -2.4
TRA2A-207ENST00000486934 ENHOQ6UWT2 76 aa0.04□□□□□ -2.4
TRA2A-207ENST00000486934 WIZO95785 1651 aa0.04□□□□□ -2.4
TRA2A-207ENST00000486934 ALMS1Q8TCU4 4167 aa0.03□□□□□ -2.4
TRA2A-207ENST00000486934 ZNF831Q5JPB2 1677 aa0.03□□□□□ -2.4
TRA2A-207ENST00000486934 FLNCQ14315 2725 aa0.03□□□□□ -2.4
TRA2A-207ENST00000486934 PLXNC1O60486 1568 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 ETDCA0A1B0GVM5 59 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 H0YAA0 97 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 GNG13Q9P2W3 67 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
TRA2A-207ENST00000486934 ADAMTS12P58397 1594 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
TRA2A-207ENST00000486934 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
TRA2A-207ENST00000486934 HSPG2P98160 4391 aa0.01□□□□□ -2.41
TRA2A-207ENST00000486934 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
TRA2A-207ENST00000486934 GPR98Q8WXG9 6306 aa0.01□□□□□ -2.41
TRA2A-207ENST00000486934 DEFB114Q30KQ6 69 aa0.01□□□□□ -2.41
TRA2A-207ENST00000486934 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
TRA2A-207ENST00000486934 IAPPP10997 89 aa0□□□□□ -2.41
TRA2A-207ENST00000486934 PRKDCP78527 4128 aaKnown RBP0□□□□□ -2.41
TRA2A-207ENST00000486934 PCNX1Q96RV3 2341 aa0□□□□□ -2.41
TRA2A-207ENST00000486934 UGGT2Q9NYU1 1516 aa0□□□□□ -2.41
TRA2A-207ENST00000486934 C4AP0C0L4 1744 aa-0.01□□□□□ -2.41
TRA2A-207ENST00000486934 C4BP0C0L5 1744 aa-0.01□□□□□ -2.41
TRA2A-207ENST00000486934 C9orf92A6NGG3 77 aa-0.01□□□□□ -2.41
TRA2A-207ENST00000486934 SPRR2AP35326 72 aa-0.01□□□□□ -2.41
TRA2A-207ENST00000486934 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
TRA2A-207ENST00000486934 KNL1Q8NG31 2342 aa-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 SETXQ7Z333 2677 aaKnown RBP-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 DEFB130BP0DP73 79 aa-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 DEFB130AP0DP74 79 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms