RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
TRA2A-207ENST00000486934 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
TRA2A-207ENST00000486934 SENP3Q9H4L4 574 aaPredicted RBP28.14■■■□□ 2.1
TRA2A-207ENST00000486934 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
TRA2A-207ENST00000486934 FOXD1Q16676 465 aa26.28■■□□□ 1.8
TRA2A-207ENST00000486934 MSH5O43196 834 aa24.71■■□□□ 1.55
TRA2A-207ENST00000486934 POTEDQ86YR6 584 aa24.68■■□□□ 1.54
TRA2A-207ENST00000486934 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
TRA2A-207ENST00000486934 PIAS4Q8N2W9 510 aaPredicted RBP24.5■■□□□ 1.51
TRA2A-207ENST00000486934 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
TRA2A-207ENST00000486934 ADRA2BP18089 450 aa24.26■■□□□ 1.47
TRA2A-207ENST00000486934 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
TRA2A-207ENST00000486934 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
TRA2A-207ENST00000486934 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
TRA2A-207ENST00000486934 PPP4R3CPQ6ZMV5 832 aa21.53■■□□□ 1.04
TRA2A-207ENST00000486934 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
TRA2A-207ENST00000486934 CACNB1Q02641 598 aaPredicted RBP21.44■■□□□ 1.02
TRA2A-207ENST00000486934 HOXD11P31277 338 aaPredicted RBP21.31■■□□□ 1
TRA2A-207ENST00000486934 CNKSR2Q8WXI2 1034 aa21.19■□□□□ 0.98
TRA2A-207ENST00000486934 RNF216Q9NWF9 866 aaPredicted RBP21.07■□□□□ 0.96
TRA2A-207ENST00000486934 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
TRA2A-207ENST00000486934 C1QBPQ07021 282 aaKnown RBP20.73■□□□□ 0.91
TRA2A-207ENST00000486934 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
TRA2A-207ENST00000486934 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
TRA2A-207ENST00000486934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRA2A-207ENST00000486934 NPM3O75607 178 aaKnown RBP20.31■□□□□ 0.84
TRA2A-207ENST00000486934 KCNA4P22459 653 aa20.18■□□□□ 0.82
TRA2A-207ENST00000486934 U3KPZ7 1027 aaPredicted RBP19.86■□□□□ 0.77
TRA2A-207ENST00000486934 CAPN15O75808 1086 aa19.69■□□□□ 0.74
TRA2A-207ENST00000486934 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
TRA2A-207ENST00000486934 DSG3P32926 999 aa19.62■□□□□ 0.73
TRA2A-207ENST00000486934 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
TRA2A-207ENST00000486934 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
TRA2A-207ENST00000486934 POTEHQ6S545 545 aa19.29■□□□□ 0.68
TRA2A-207ENST00000486934 APLP2Q06481 763 aa19.25■□□□□ 0.67
TRA2A-207ENST00000486934 ABCB7O75027 752 aa19.22■□□□□ 0.67
TRA2A-207ENST00000486934 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-207ENST00000486934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
TRA2A-207ENST00000486934 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
TRA2A-207ENST00000486934 SLC4A1APQ9BWU0 796 aaKnown RBP19.08■□□□□ 0.64
TRA2A-207ENST00000486934 SAMD1Q6SPF0 538 aaPredicted RBP19.06■□□□□ 0.64
TRA2A-207ENST00000486934 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
TRA2A-207ENST00000486934 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
TRA2A-207ENST00000486934 POLA2Q14181 598 aa18.7■□□□□ 0.58
TRA2A-207ENST00000486934 ZBTB22O15209 634 aa18.68■□□□□ 0.58
TRA2A-207ENST00000486934 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
TRA2A-207ENST00000486934 CHRDL2Q6WN34 429 aa18.46■□□□□ 0.55
TRA2A-207ENST00000486934 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
TRA2A-207ENST00000486934 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
TRA2A-207ENST00000486934 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
TRA2A-207ENST00000486934 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
TRA2A-207ENST00000486934 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
TRA2A-207ENST00000486934 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
TRA2A-207ENST00000486934 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
TRA2A-207ENST00000486934 PIP4P2Q8N4L2 257 aa17.95■□□□□ 0.46
TRA2A-207ENST00000486934 SP7Q8TDD2 431 aaPredicted RBP17.93■□□□□ 0.46
TRA2A-207ENST00000486934 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
TRA2A-207ENST00000486934 ATXN8OSP0DMR3 200 aa17.85■□□□□ 0.45
TRA2A-207ENST00000486934 FXR2P51116 673 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRA2A-207ENST00000486934 HAX1O00165 279 aa17.74■□□□□ 0.43
TRA2A-207ENST00000486934 FBLN2P98095 1184 aa17.69■□□□□ 0.42
TRA2A-207ENST00000486934 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
TRA2A-207ENST00000486934 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
TRA2A-207ENST00000486934 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
TRA2A-207ENST00000486934 MKRN4PQ13434 485 aaPredicted RBP17.52■□□□□ 0.4
TRA2A-207ENST00000486934 EVX2Q03828 476 aa17.49■□□□□ 0.39
TRA2A-207ENST00000486934 CLEC11AQ9Y240 323 aa17.49■□□□□ 0.39
TRA2A-207ENST00000486934 SPDYE1Q8NFV5 336 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-207ENST00000486934 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-207ENST00000486934 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
TRA2A-207ENST00000486934 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
TRA2A-207ENST00000486934 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
TRA2A-207ENST00000486934 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
TRA2A-207ENST00000486934 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRA2A-207ENST00000486934 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
TRA2A-207ENST00000486934 GABBR2O75899 941 aa17.06■□□□□ 0.32
TRA2A-207ENST00000486934 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
TRA2A-207ENST00000486934 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
TRA2A-207ENST00000486934 LHX8Q68G74 356 aa16.82■□□□□ 0.28
TRA2A-207ENST00000486934 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
TRA2A-207ENST00000486934 CLCN6P51797 869 aa16.64■□□□□ 0.25
TRA2A-207ENST00000486934 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
TRA2A-207ENST00000486934 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
TRA2A-207ENST00000486934 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
TRA2A-207ENST00000486934 FKBP8Q14318 412 aa16.57■□□□□ 0.24
TRA2A-207ENST00000486934 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
TRA2A-207ENST00000486934 DCBLD2Q96PD2 775 aa16.56■□□□□ 0.24
TRA2A-207ENST00000486934 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
TRA2A-207ENST00000486934 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-207ENST00000486934 PROM2Q8N271 834 aa16.38■□□□□ 0.21
TRA2A-207ENST00000486934 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
TRA2A-207ENST00000486934 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
TRA2A-207ENST00000486934 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRA2A-207ENST00000486934 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-207ENST00000486934 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
TRA2A-207ENST00000486934 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
TRA2A-207ENST00000486934 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
TRA2A-207ENST00000486934 MS4A3Q96HJ5 214 aa16.07■□□□□ 0.16
TRA2A-207ENST00000486934 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
TRA2A-207ENST00000486934 TSPYL2Q9H2G4 693 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms