RNA–Protein interactions for RNA: ENST00000485506.1

NECTIN3-207, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 2

Gene NECTIN3, Length 314 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-207ENST00000485506 SPRR2BP35325 72 aa0□□□□□ -2.41
NECTIN3-207ENST00000485506 ATRQ13535 2644 aa0□□□□□ -2.41
NECTIN3-207ENST00000485506 NCOA2Q15596 1464 aa0□□□□□ -2.41
NECTIN3-207ENST00000485506 DEFB121Q5J5C9 76 aa0□□□□□ -2.41
NECTIN3-207ENST00000485506 LELP1Q5T871 98 aa0□□□□□ -2.41
NECTIN3-207ENST00000485506 SUPT6HQ7KZ85 1726 aaKnown RBP0□□□□□ -2.41
NECTIN3-207ENST00000485506 CEP170BQ9Y4F5 1589 aaPredicted RBP0□□□□□ -2.41
NECTIN3-207ENST00000485506 EP300Q09472 2414 aaPredicted RBP-0.01□□□□□ -2.41
NECTIN3-207ENST00000485506 MAGI3Q5TCQ9 1506 aa-0.01□□□□□ -2.41
NECTIN3-207ENST00000485506 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
NECTIN3-207ENST00000485506 SPTA1P02549 2419 aa-0.01□□□□□ -2.41
NECTIN3-207ENST00000485506 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
NECTIN3-207ENST00000485506 DCAF1Q9Y4B6 1507 aa-0.02□□□□□ -2.41
NECTIN3-207ENST00000485506 CCDC88BA6NC98 1476 aa-0.02□□□□□ -2.41
NECTIN3-207ENST00000485506 ERVK-7P63135 1459 aa-0.02□□□□□ -2.41
NECTIN3-207ENST00000485506 ARHGAP35Q9NRY4 1499 aa-0.02□□□□□ -2.41
NECTIN3-207ENST00000485506 ABCC1P33527 1531 aa-0.03□□□□□ -2.41
NECTIN3-207ENST00000485506 UMAD1C9J7I0 102 aa-0.03□□□□□ -2.41
NECTIN3-207ENST00000485506 HMGA1P17096 107 aaKnown RBP-0.03□□□□□ -2.41
NECTIN3-207ENST00000485506 DEFB135Q30KP9 77 aa-0.03□□□□□ -2.41
NECTIN3-207ENST00000485506 POLR1AO95602 1720 aaPredicted RBP-0.04□□□□□ -2.42
NECTIN3-207ENST00000485506 IFI27P40305 119 aaPredicted RBP-0.04□□□□□ -2.42
NECTIN3-207ENST00000485506 KDM5DQ9BY66 1539 aa-0.04□□□□□ -2.42
NECTIN3-207ENST00000485506 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
NECTIN3-207ENST00000485506 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
NECTIN3-207ENST00000485506 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
NECTIN3-207ENST00000485506 H3BUT2 72 aa-0.05□□□□□ -2.42
NECTIN3-207ENST00000485506 NDUFA3O95167 84 aa-0.05□□□□□ -2.42
NECTIN3-207ENST00000485506 LTN1O94822 1766 aa-0.05□□□□□ -2.42
NECTIN3-207ENST00000485506 PIK3C2BO00750 1634 aa-0.05□□□□□ -2.42
NECTIN3-207ENST00000485506 NWD1Q149M9 1564 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 DIP2BQ9P265 1576 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 IFI6P09912 130 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 BVES-AS1Q5T3Y7 98 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 LRP2P98164 4655 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 SCRIBQ14160 1630 aa-0.06□□□□□ -2.42
NECTIN3-207ENST00000485506 LCE6AA0A183 80 aa-0.07□□□□□ -2.42
NECTIN3-207ENST00000485506 C3orf79P0CE67 100 aa-0.07□□□□□ -2.42
NECTIN3-207ENST00000485506 NSD1Q96L73 2696 aaPredicted RBP-0.08□□□□□ -2.42
NECTIN3-207ENST00000485506 A0A087WXM4 84 aa-0.08□□□□□ -2.42
NECTIN3-207ENST00000485506 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.08□□□□□ -2.42
NECTIN3-207ENST00000485506 CICQ96RK0 1608 aaPredicted RBP-0.09□□□□□ -2.42
NECTIN3-207ENST00000485506 CFAP74Q9C0B2 1584 aa-0.09□□□□□ -2.42
NECTIN3-207ENST00000485506 ZNF831Q5JPB2 1677 aa-0.1□□□□□ -2.43
NECTIN3-207ENST00000485506 SMIM13P0DJ93 91 aa-0.1□□□□□ -2.43
NECTIN3-207ENST00000485506 NREPQ16612 68 aa-0.1□□□□□ -2.43
NECTIN3-207ENST00000485506 PRO3102Q9H379 93 aa-0.1□□□□□ -2.43
NECTIN3-207ENST00000485506 DOT1LQ8TEK3 1739 aa-0.1□□□□□ -2.43
NECTIN3-207ENST00000485506 MACF1Q9UPN3 7388 aaKnown RBP-0.11□□□□□ -2.43
NECTIN3-207ENST00000485506 C18orf32Q8TCD1 76 aa-0.11□□□□□ -2.43
NECTIN3-207ENST00000485506 SETXQ7Z333 2677 aaKnown RBP-0.11□□□□□ -2.43
NECTIN3-207ENST00000485506 ANKARQ7Z5J8 1434 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 RRBP1Q9P2E9 1410 aaKnown RBP-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 NESP48681 1621 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 PTPN23Q9H3S7 1636 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 WNK1Q9H4A3 2382 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 APC2O95996 2303 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 FLNAP21333 2647 aaKnown RBP-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 ARFGEF2Q9Y6D5 1785 aa-0.12□□□□□ -2.43
NECTIN3-207ENST00000485506 ADAMTS12P58397 1594 aa-0.13□□□□□ -2.43
NECTIN3-207ENST00000485506 NDUFA4O00483 81 aa-0.13□□□□□ -2.43
NECTIN3-207ENST00000485506 MAP1BP46821 2468 aaKnown RBP-0.13□□□□□ -2.43
NECTIN3-207ENST00000485506 ANKRD50Q9ULJ7 1429 aa-0.13□□□□□ -2.43
NECTIN3-207ENST00000485506 LRP1BQ9NZR2 4599 aa-0.14□□□□□ -2.43
NECTIN3-207ENST00000485506 REV3LO60673 3130 aa-0.14□□□□□ -2.43
NECTIN3-207ENST00000485506 H0YGG7 62 aa-0.14□□□□□ -2.43
NECTIN3-207ENST00000485506 LINC00158P58513 81 aa-0.15□□□□□ -2.43
NECTIN3-207ENST00000485506 C4AP0C0L4 1744 aa-0.16□□□□□ -2.43
NECTIN3-207ENST00000485506 C4BP0C0L5 1744 aa-0.16□□□□□ -2.43
NECTIN3-207ENST00000485506 WIZO95785 1651 aa-0.16□□□□□ -2.44
NECTIN3-207ENST00000485506 PLXNC1O60486 1568 aa-0.16□□□□□ -2.44
NECTIN3-207ENST00000485506 COL6A3P12111 3177 aa-0.16□□□□□ -2.44
NECTIN3-207ENST00000485506 FLNBO75369 2602 aaKnown RBP-0.17□□□□□ -2.44
NECTIN3-207ENST00000485506 CNOT1A5YKK6 2376 aaKnown RBP-0.17□□□□□ -2.44
NECTIN3-207ENST00000485506 MAP3K1Q13233 1512 aa-0.17□□□□□ -2.44
NECTIN3-207ENST00000485506 CD163L1Q9NR16 1453 aa-0.17□□□□□ -2.44
NECTIN3-207ENST00000485506 ACANP16112 2415 aa-0.18□□□□□ -2.44
NECTIN3-207ENST00000485506 DEPDC5O75140 1603 aa-0.18□□□□□ -2.44
NECTIN3-207ENST00000485506 PCNX1Q96RV3 2341 aa-0.18□□□□□ -2.44
NECTIN3-207ENST00000485506 SPRR2AP35326 72 aa-0.19□□□□□ -2.44
NECTIN3-207ENST00000485506 CFAP43Q8NDM7 1665 aa-0.19□□□□□ -2.44
NECTIN3-207ENST00000485506 PKHD1P08F94 4074 aa-0.19□□□□□ -2.44
NECTIN3-207ENST00000485506 DEFB131BA0A096LNP1 70 aa-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 LYNX1G3V0Z9 82 aa-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 MRPL33O75394 65 aaKnown RBP-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 SCN11AQ9UI33 1791 aa-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 ABCA8O94911 1581 aa-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 ZANQ9Y493 2812 aa-0.2□□□□□ -2.44
NECTIN3-207ENST00000485506 THOC2Q8NI27 1593 aaKnown RBP-0.22□□□□□ -2.44
NECTIN3-207ENST00000485506 KNL1Q8NG31 2342 aa-0.22□□□□□ -2.44
NECTIN3-207ENST00000485506 H0YAA0 97 aa-0.22□□□□□ -2.44
NECTIN3-207ENST00000485506 STAB1Q9NY15 2570 aa-0.22□□□□□ -2.45
NECTIN3-207ENST00000485506 RALGAPBQ86X10 1494 aa-0.22□□□□□ -2.45
NECTIN3-207ENST00000485506 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
NECTIN3-207ENST00000485506 TRANK1O15050 2925 aa-0.23□□□□□ -2.45
NECTIN3-207ENST00000485506 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
NECTIN3-207ENST00000485506 HFM1A2PYH4 1435 aa-0.23□□□□□ -2.45
NECTIN3-207ENST00000485506 PLCH1Q4KWH8 1693 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms