RNA–Protein interactions for RNA: ENST00000485506.1

NECTIN3-207, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 2

Gene NECTIN3, Length 314 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-207ENST00000485506 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
NECTIN3-207ENST00000485506 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
NECTIN3-207ENST00000485506 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
NECTIN3-207ENST00000485506 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
NECTIN3-207ENST00000485506 FOXD1Q16676 465 aa21.75■■□□□ 1.07
NECTIN3-207ENST00000485506 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
NECTIN3-207ENST00000485506 MSH5O43196 834 aa20.45■□□□□ 0.86
NECTIN3-207ENST00000485506 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
NECTIN3-207ENST00000485506 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
NECTIN3-207ENST00000485506 ADRA2BP18089 450 aa20.24■□□□□ 0.83
NECTIN3-207ENST00000485506 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
NECTIN3-207ENST00000485506 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
NECTIN3-207ENST00000485506 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
NECTIN3-207ENST00000485506 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
NECTIN3-207ENST00000485506 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
NECTIN3-207ENST00000485506 CNKSR2Q8WXI2 1034 aa17.92■□□□□ 0.46
NECTIN3-207ENST00000485506 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
NECTIN3-207ENST00000485506 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
NECTIN3-207ENST00000485506 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
NECTIN3-207ENST00000485506 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
NECTIN3-207ENST00000485506 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
NECTIN3-207ENST00000485506 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
NECTIN3-207ENST00000485506 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
NECTIN3-207ENST00000485506 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
NECTIN3-207ENST00000485506 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
NECTIN3-207ENST00000485506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
NECTIN3-207ENST00000485506 KCNA4P22459 653 aa16.9■□□□□ 0.3
NECTIN3-207ENST00000485506 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
NECTIN3-207ENST00000485506 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
NECTIN3-207ENST00000485506 CAPN15O75808 1086 aa16.38■□□□□ 0.21
NECTIN3-207ENST00000485506 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
NECTIN3-207ENST00000485506 APLP2Q06481 763 aa16.33■□□□□ 0.2
NECTIN3-207ENST00000485506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
NECTIN3-207ENST00000485506 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
NECTIN3-207ENST00000485506 DSG3P32926 999 aa16.28■□□□□ 0.2
NECTIN3-207ENST00000485506 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
NECTIN3-207ENST00000485506 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
NECTIN3-207ENST00000485506 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
NECTIN3-207ENST00000485506 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
NECTIN3-207ENST00000485506 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
NECTIN3-207ENST00000485506 ABCB7O75027 752 aa15.95■□□□□ 0.14
NECTIN3-207ENST00000485506 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
NECTIN3-207ENST00000485506 POLA2Q14181 598 aa15.68■□□□□ 0.1
NECTIN3-207ENST00000485506 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
NECTIN3-207ENST00000485506 POTEHQ6S545 545 aa15.58■□□□□ 0.08
NECTIN3-207ENST00000485506 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
NECTIN3-207ENST00000485506 ZBTB22O15209 634 aa15.49■□□□□ 0.07
NECTIN3-207ENST00000485506 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
NECTIN3-207ENST00000485506 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
NECTIN3-207ENST00000485506 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
NECTIN3-207ENST00000485506 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
NECTIN3-207ENST00000485506 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
NECTIN3-207ENST00000485506 FBLN2P98095 1184 aa15.07■□□□□ 0
NECTIN3-207ENST00000485506 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
NECTIN3-207ENST00000485506 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
NECTIN3-207ENST00000485506 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
NECTIN3-207ENST00000485506 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
NECTIN3-207ENST00000485506 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
NECTIN3-207ENST00000485506 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
NECTIN3-207ENST00000485506 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
NECTIN3-207ENST00000485506 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
NECTIN3-207ENST00000485506 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
NECTIN3-207ENST00000485506 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
NECTIN3-207ENST00000485506 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
NECTIN3-207ENST00000485506 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
NECTIN3-207ENST00000485506 SP7Q8TDD2 431 aaPredicted RBP14.62□□□□□ -0.07
NECTIN3-207ENST00000485506 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
NECTIN3-207ENST00000485506 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
NECTIN3-207ENST00000485506 HAX1O00165 279 aa14.57□□□□□ -0.08
NECTIN3-207ENST00000485506 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
NECTIN3-207ENST00000485506 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
NECTIN3-207ENST00000485506 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
NECTIN3-207ENST00000485506 EVX2Q03828 476 aa14.3□□□□□ -0.12
NECTIN3-207ENST00000485506 C19orf67A6NJJ6 358 aa14.29□□□□□ -0.12
NECTIN3-207ENST00000485506 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
NECTIN3-207ENST00000485506 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
NECTIN3-207ENST00000485506 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
NECTIN3-207ENST00000485506 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
NECTIN3-207ENST00000485506 GABBR2O75899 941 aa14.05□□□□□ -0.16
NECTIN3-207ENST00000485506 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
NECTIN3-207ENST00000485506 CREBZFQ9NS37 354 aa14□□□□□ -0.17
NECTIN3-207ENST00000485506 CLCN6P51797 869 aa13.99□□□□□ -0.17
NECTIN3-207ENST00000485506 PROM2Q8N271 834 aa13.87□□□□□ -0.19
NECTIN3-207ENST00000485506 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
NECTIN3-207ENST00000485506 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
NECTIN3-207ENST00000485506 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
NECTIN3-207ENST00000485506 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
NECTIN3-207ENST00000485506 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
NECTIN3-207ENST00000485506 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
NECTIN3-207ENST00000485506 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
NECTIN3-207ENST00000485506 LHX8Q68G74 356 aa13.71□□□□□ -0.21
NECTIN3-207ENST00000485506 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
NECTIN3-207ENST00000485506 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
NECTIN3-207ENST00000485506 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
NECTIN3-207ENST00000485506 MIER1Q8N108 512 aa13.55□□□□□ -0.24
NECTIN3-207ENST00000485506 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
NECTIN3-207ENST00000485506 FKBP8Q14318 412 aa13.46□□□□□ -0.25
NECTIN3-207ENST00000485506 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
NECTIN3-207ENST00000485506 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
NECTIN3-207ENST00000485506 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms