RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 NHP2Q9NX24 153 aaKnown RBP2.51□□□□□ -2.01
RFC4-212ENST00000479307 GNG13Q9P2W3 67 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
RFC4-212ENST00000479307 C19orf71A6NCJ1 209 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 CEBPZOSA8MTT3 80 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 PPYP01298 95 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 IGKV1-5P01602 117 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 CCKP06307 115 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 CKS2P33552 79 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 LINC00313P59037 77 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 INSL4Q14641 139 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 SS18Q15532 418 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 ZNF56Q15929 161 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 Q6ZSA8 131 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 C7orf65Q6ZTY9 151 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 DIRC1Q969H9 104 aa2.5□□□□□ -2.01
RFC4-212ENST00000479307 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 A0A087WTM6 91 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 TRAV3A0A0B4J244 114 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 FAM223BA6NKX1 122 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 J3QRE1 110 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 K7ERJ3 54 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 PLGLAQ15195 96 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 FAM223AQ8IWN6 122 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 CYSTM1Q9H1C7 97 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 TP73-AS1Q9UF72 201 aa2.49□□□□□ -2.01
RFC4-212ENST00000479307 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 IGKV1-9A0A0C4DH69 117 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 TRBV10-2A0A0K0K1G8 114 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 C9JCJ5 164 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 H7BZZ5 65 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 S100A4P26447 101 aaKnown RBP2.48□□□□□ -2.01
RFC4-212ENST00000479307 UBE2D1P51668 147 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 CCL18P55774 89 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 KLKP1Q107X0 134 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 FXYD3Q14802 87 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 Q1T7F1 81 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 LINC01590Q5TEZ4 76 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 ZNF833PQ6ZTB9 187 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 SLC50A1Q9BRV3 221 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 TMEM14BQ9NUH8 114 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 TAS2R4Q9NYW5 299 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
RFC4-212ENST00000479307 TIMM9Q9Y5J7 89 aa2.48□□□□□ -2.01
RFC4-212ENST00000479307 TRBV7-3A0A075B6L6 115 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 IGHV3-43A0A0B4J1X8 118 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 TRAV13-2A0A0B4J235 113 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 A0A0B4J2C4 111 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 PIGBOS1A0A0B4J2F0 54 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 CTXND1A0A1B0GTU2 59 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 CRYM-AS1A6NIL9 109 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 LINC01554Q52M75 96 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 ATP11AUNQ6ZP68 121 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 NPCDR1Q9BY65 106 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 C11orf1Q9H5F2 150 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 OSTCQ9NRP0 149 aa2.47□□□□□ -2.01
RFC4-212ENST00000479307 TRBV25-1A0A075B6N4 114 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 IGKV1-12A0A0C4DH73 117 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 A0A1B0GW54 56 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 COX7A2P2O60397 106 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 LTAP01374 205 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 IGKV1D-12P01611 117 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 SAA2P0DJI9 122 aaPredicted RBP2.46□□□□□ -2.02
RFC4-212ENST00000479307 HTN3P15516 51 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 RNASE4P34096 147 aaKnown RBP2.46□□□□□ -2.02
RFC4-212ENST00000479307 RBM3P98179 157 aaKnown RBP2.46□□□□□ -2.02
RFC4-212ENST00000479307 CIRBPQ14011 172 aaKnown RBP2.46□□□□□ -2.02
RFC4-212ENST00000479307 RHOHQ15669 191 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 ATXN8Q156A1 80 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 ESRGQ1W209 222 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 DAND5Q8N907 189 aa2.46□□□□□ -2.02
RFC4-212ENST00000479307 TRBV7-1A0A0A6YYK4 115 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 SMIM27A0A1W2PRY6 76 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 A6NN06 94 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 H3BVH4 76 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 J3QLW9 94 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 PRM2P04554 102 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 IFI27P40305 119 aaPredicted RBP2.45□□□□□ -2.02
RFC4-212ENST00000479307 XCL1P47992 114 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 SUPT4H1P63272 117 aaKnown RBP2.45□□□□□ -2.02
RFC4-212ENST00000479307 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
RFC4-212ENST00000479307 Q6JHZ5 121 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 LYPD5Q6UWN5 251 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 SCXQ7RTU7 201 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 V9GYV3 84 aa2.45□□□□□ -2.02
RFC4-212ENST00000479307 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
RFC4-212ENST00000479307 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
RFC4-212ENST00000479307 TMSB15BA0A087X1C1 80 aa2.44□□□□□ -2.02
RFC4-212ENST00000479307 LOC107984156A0A0G2JMH3 177 aa2.44□□□□□ -2.02
RFC4-212ENST00000479307 TMEM30CPA0ZSE6 113 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms