RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 H0Y9J4 135 aa6.71□□□□□ -1.34
SEMA4D-216ENST00000474258 M0QXV9 152 aa6.71□□□□□ -1.34
SEMA4D-216ENST00000474258 UBE2BP63146 152 aa6.71□□□□□ -1.34
SEMA4D-216ENST00000474258 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
SEMA4D-216ENST00000474258 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.34
SEMA4D-216ENST00000474258 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
SEMA4D-216ENST00000474258 NDUFC2O95298 119 aa6.7□□□□□ -1.34
SEMA4D-216ENST00000474258 NPC2P61916 151 aa6.7□□□□□ -1.34
SEMA4D-216ENST00000474258 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
SEMA4D-216ENST00000474258 C9orf129Q5T035 196 aaKnown RBP6.69□□□□□ -1.34
SEMA4D-216ENST00000474258 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
SEMA4D-216ENST00000474258 IGLV1-50A0A075B6I6 118 aa6.68□□□□□ -1.34
SEMA4D-216ENST00000474258 K7ERJ3 54 aa6.68□□□□□ -1.34
SEMA4D-216ENST00000474258 IGKV2-28A0A075B6P5 120 aa6.67□□□□□ -1.34
SEMA4D-216ENST00000474258 IGKV2D-28P01615 120 aa6.67□□□□□ -1.34
SEMA4D-216ENST00000474258 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
SEMA4D-216ENST00000474258 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
SEMA4D-216ENST00000474258 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
SEMA4D-216ENST00000474258 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
SEMA4D-216ENST00000474258 XAGE1AQ9HD64 81 aa6.66□□□□□ -1.34
SEMA4D-216ENST00000474258 TRAV13-2A0A0B4J235 113 aa6.65□□□□□ -1.34
SEMA4D-216ENST00000474258 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
SEMA4D-216ENST00000474258 Q8NDZ9 215 aa6.65□□□□□ -1.34
SEMA4D-216ENST00000474258 C22orf24Q9Y442 160 aa6.65□□□□□ -1.34
SEMA4D-216ENST00000474258 ZNF861PO60384 105 aa6.64□□□□□ -1.35
SEMA4D-216ENST00000474258 VPREB1P12018 145 aa6.64□□□□□ -1.35
SEMA4D-216ENST00000474258 RPL13AP40429 203 aaKnown RBP6.64□□□□□ -1.35
SEMA4D-216ENST00000474258 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
SEMA4D-216ENST00000474258 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
SEMA4D-216ENST00000474258 TSPAN13O95857 204 aa6.62□□□□□ -1.35
SEMA4D-216ENST00000474258 LPAP08519 4548 aa6.62□□□□□ -1.35
SEMA4D-216ENST00000474258 H3BUT2 72 aa6.61□□□□□ -1.35
SEMA4D-216ENST00000474258 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
SEMA4D-216ENST00000474258 M0R378 163 aa6.6□□□□□ -1.35
SEMA4D-216ENST00000474258 IGLV6-57P01721 117 aa6.6□□□□□ -1.35
SEMA4D-216ENST00000474258 RPL28P46779 137 aaKnown RBP6.6□□□□□ -1.35
SEMA4D-216ENST00000474258 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
SEMA4D-216ENST00000474258 A0A1B0GV90 55 aa6.59□□□□□ -1.35
SEMA4D-216ENST00000474258 A0A1W2PPM0 123 aa6.59□□□□□ -1.35
SEMA4D-216ENST00000474258 H7C2G1 150 aa6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 NCR3O14931 201 aa6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 BCE1O60756 84 aa6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 PRR4Q16378 134 aa6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 OR13C6PQ8NH95 151 aa6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
SEMA4D-216ENST00000474258 FABP2P12104 132 aa6.57□□□□□ -1.36
SEMA4D-216ENST00000474258 Q1RN00 199 aa6.57□□□□□ -1.36
SEMA4D-216ENST00000474258 S100A7L2Q5SY68 101 aa6.57□□□□□ -1.36
SEMA4D-216ENST00000474258 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
SEMA4D-216ENST00000474258 LINC00167Q96N53 147 aa6.57□□□□□ -1.36
SEMA4D-216ENST00000474258 RPL37AP8A6NKH3 93 aa6.56□□□□□ -1.36
SEMA4D-216ENST00000474258 TRIAP1O43715 76 aa6.56□□□□□ -1.36
SEMA4D-216ENST00000474258 COX6CP09669 75 aa6.56□□□□□ -1.36
SEMA4D-216ENST00000474258 PSMB2P49721 201 aa6.56□□□□□ -1.36
SEMA4D-216ENST00000474258 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 VAMP3Q15836 100 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 LYRM7Q5U5X0 104 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 CBY1Q9Y3M2 126 aa6.55□□□□□ -1.36
SEMA4D-216ENST00000474258 TRBV20-1A0A075B6N2 111 aa6.54□□□□□ -1.36
SEMA4D-216ENST00000474258 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
SEMA4D-216ENST00000474258 CRYGAP11844 174 aa6.54□□□□□ -1.36
SEMA4D-216ENST00000474258 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
SEMA4D-216ENST00000474258 A0A087X002 238 aa6.53□□□□□ -1.36
SEMA4D-216ENST00000474258 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
SEMA4D-216ENST00000474258 H0YGX0 51 aa6.53□□□□□ -1.36
SEMA4D-216ENST00000474258 K7EP34 96 aa6.53□□□□□ -1.36
SEMA4D-216ENST00000474258 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
SEMA4D-216ENST00000474258 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
SEMA4D-216ENST00000474258 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
SEMA4D-216ENST00000474258 UBE2AP49459 152 aa6.52□□□□□ -1.37
SEMA4D-216ENST00000474258 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
SEMA4D-216ENST00000474258 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
SEMA4D-216ENST00000474258 TCL1BO95988 128 aa6.51□□□□□ -1.37
SEMA4D-216ENST00000474258 SPRR1AP35321 89 aa6.51□□□□□ -1.37
SEMA4D-216ENST00000474258 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
SEMA4D-216ENST00000474258 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
SEMA4D-216ENST00000474258 KRTAP13-1Q8IUC0 172 aa6.5□□□□□ -1.37
SEMA4D-216ENST00000474258 LST1O00453 97 aa6.49□□□□□ -1.37
SEMA4D-216ENST00000474258 PRYO14603 147 aa6.49□□□□□ -1.37
SEMA4D-216ENST00000474258 ATXN8Q156A1 80 aa6.49□□□□□ -1.37
SEMA4D-216ENST00000474258 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
SEMA4D-216ENST00000474258 A0A1B0GX51 115 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 TRACP01848 142 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 FAM229BQ4G0N7 80 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 CLEC2BQ92478 149 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
SEMA4D-216ENST00000474258 H3BMG7 143 aa6.47□□□□□ -1.37
SEMA4D-216ENST00000474258 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
SEMA4D-216ENST00000474258 LINC00575Q6W349 94 aa6.47□□□□□ -1.37
SEMA4D-216ENST00000474258 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
SEMA4D-216ENST00000474258 COX7BP24311 80 aa6.46□□□□□ -1.38
SEMA4D-216ENST00000474258 ELOF1P60002 83 aaKnown RBP6.46□□□□□ -1.38
SEMA4D-216ENST00000474258 B5MCH6 92 aa6.45□□□□□ -1.38
SEMA4D-216ENST00000474258 PRLHP81277 87 aa6.45□□□□□ -1.38
SEMA4D-216ENST00000474258 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
SEMA4D-216ENST00000474258 PRO0461Q9UI25 63 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms