RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 H0YGG7 62 aa-0.62□□□□□ -2.51
COPS3-206ENST00000471414 HMGN2P05204 90 aaKnown RBP-0.62□□□□□ -2.51
COPS3-206ENST00000471414 LRRC9Q6ZRR7 1453 aa-0.62□□□□□ -2.51
COPS3-206ENST00000471414 PKD1P98161 4303 aa-0.62□□□□□ -2.51
COPS3-206ENST00000471414 SPTBN4Q9H254 2564 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 GYPAP02724 150 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 SMIM11AP58511 58 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 COX6B2Q6YFQ2 88 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 ATP7BP35670 1465 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 RGPD3A6NKT7 1758 aaPredicted RBP-0.63□□□□□ -2.51
COPS3-206ENST00000471414 LAMA5O15230 3695 aa-0.63□□□□□ -2.51
COPS3-206ENST00000471414 NBASA2RRP1 2371 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.64□□□□□ -2.51
COPS3-206ENST00000471414 A0A1B0GUT8 65 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 RPL38P63173 70 aaKnown RBP-0.64□□□□□ -2.51
COPS3-206ENST00000471414 PEA15Q15121 130 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 PLGLAQ15195 96 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 SNHG12Q9BXW3 62 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 REV3LO60673 3130 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 TGP01266 2768 aa-0.64□□□□□ -2.51
COPS3-206ENST00000471414 RYR3Q15413 4870 aa-0.65□□□□□ -2.51
COPS3-206ENST00000471414 S100A8P05109 93 aa-0.65□□□□□ -2.51
COPS3-206ENST00000471414 C20orf78Q9BR46 151 aa-0.65□□□□□ -2.51
COPS3-206ENST00000471414 POLR1AO95602 1720 aaPredicted RBP-0.65□□□□□ -2.51
COPS3-206ENST00000471414 CEP162Q5TB80 1403 aa-0.65□□□□□ -2.51
COPS3-206ENST00000471414 PKIAP61925 76 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 GAFA1Q96PS6 74 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 NEXMIFQ5QGS0 1516 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 LTN1O94822 1766 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 TROQ12816 1431 aaPredicted RBP-0.66□□□□□ -2.52
COPS3-206ENST00000471414 NF1P21359 2839 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 HERC1Q15751 4861 aa-0.66□□□□□ -2.52
COPS3-206ENST00000471414 SONP18583 2426 aaKnown RBP-0.67□□□□□ -2.52
COPS3-206ENST00000471414 MXRA5Q9NR99 2828 aa-0.67□□□□□ -2.52
COPS3-206ENST00000471414 IQCF6A8MYZ5 107 aa-0.67□□□□□ -2.52
COPS3-206ENST00000471414 NDUFA3O95167 84 aa-0.67□□□□□ -2.52
COPS3-206ENST00000471414 CREBBPQ92793 2442 aa-0.67□□□□□ -2.52
COPS3-206ENST00000471414 CYB5AP00167 134 aa-0.68□□□□□ -2.52
COPS3-206ENST00000471414 AKAP13Q12802 2813 aa-0.69□□□□□ -2.52
COPS3-206ENST00000471414 TMEM131LA2VDJ0 1609 aa-0.69□□□□□ -2.52
COPS3-206ENST00000471414 PDE4DIPQ5VU43 2346 aa-0.69□□□□□ -2.52
COPS3-206ENST00000471414 LYSTQ99698 3801 aa-0.69□□□□□ -2.52
COPS3-206ENST00000471414 TRANK1O15050 2925 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 NESP48681 1621 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 KRTAP20-2Q3LI61 65 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 SPRR2FQ96RM1 72 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 DNAH6Q9C0G6 4158 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 NWD1Q149M9 1564 aa-0.7□□□□□ -2.52
COPS3-206ENST00000471414 DOT1LQ8TEK3 1739 aa-0.71□□□□□ -2.52
COPS3-206ENST00000471414 TRAV21A0A0B4J279 112 aa-0.71□□□□□ -2.52
COPS3-206ENST00000471414 MYMXA0A1B0GTQ4 84 aa-0.71□□□□□ -2.52
COPS3-206ENST00000471414 FAT3Q8TDW7 4589 aa-0.71□□□□□ -2.52
COPS3-206ENST00000471414 TNRC18O15417 2968 aaPredicted RBP-0.71□□□□□ -2.52
COPS3-206ENST00000471414 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.71□□□□□ -2.52
COPS3-206ENST00000471414 SCN11AQ9UI33 1791 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 FAT1Q14517 4588 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 USH2AO75445 5202 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 MT1AP04731 61 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 WFDC9Q8NEX5 89 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 SPG11Q96JI7 2443 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 USP32Q8NFA0 1604 aa-0.72□□□□□ -2.52
COPS3-206ENST00000471414 PLXNC1O60486 1568 aa-0.73□□□□□ -2.53
COPS3-206ENST00000471414 PYY3Q5JQD4 70 aa-0.73□□□□□ -2.53
COPS3-206ENST00000471414 ABCC3O15438 1527 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 ZNF831Q5JPB2 1677 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 PPLO60437 1756 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 NBPF19A0A087WUL8 3843 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 H3BNG1 76 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 SNRPFP62306 86 aaKnown RBP-0.74□□□□□ -2.53
COPS3-206ENST00000471414 PRO3102Q9H379 93 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 CCNB3Q8WWL7 1395 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 PLIN4Q96Q06 1357 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 STARD9Q9P2P6 4700 aa-0.74□□□□□ -2.53
COPS3-206ENST00000471414 PRRC2CQ9Y520 2896 aaKnown RBP-0.75□□□□□ -2.53
COPS3-206ENST00000471414 UBR4Q5T4S7 5183 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 EPG5Q9HCE0 2579 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 NDUFB1O75438 58 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 C3orf79P0CE67 100 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 Q9H521 79 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 TTC37Q6PGP7 1564 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 KIF14Q15058 1648 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 MAP3K4Q9Y6R4 1608 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 HIVEP1P15822 2718 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 WIZO95785 1651 aa-0.75□□□□□ -2.53
COPS3-206ENST00000471414 DNAH9Q9NYC9 4486 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 C9orf92A6NGG3 77 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 CEBPZOSA8MTT3 80 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 K7EP34 96 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 MT4P47944 62 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 LINC00643Q86TS7 51 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 S100A16Q96FQ6 103 aaKnown RBP-0.76□□□□□ -2.53
COPS3-206ENST00000471414 RABAC1Q9UI14 185 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 V9GYS6 101 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 HERC2O95714 4834 aa-0.76□□□□□ -2.53
COPS3-206ENST00000471414 RYR1P21817 5038 aa-0.77□□□□□ -2.53
COPS3-206ENST00000471414 HECTD1Q9ULT8 2610 aa-0.77□□□□□ -2.53
COPS3-206ENST00000471414 ARFGEF2Q9Y6D5 1785 aa-0.77□□□□□ -2.53
COPS3-206ENST00000471414 KIAA1109Q2LD37 5005 aa-0.77□□□□□ -2.53
COPS3-206ENST00000471414 URB2Q14146 1524 aaKnown RBP-0.77□□□□□ -2.53
COPS3-206ENST00000471414 MAGI3Q5TCQ9 1506 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms