RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RGPD3A6NKT7 1758 aaPredicted RBP-0.33□□□□□ -2.46
VPS13A-209ENST00000467124 COL6A3P12111 3177 aa-0.33□□□□□ -2.46
VPS13A-209ENST00000467124 LAMA5O15230 3695 aa-0.34□□□□□ -2.46
VPS13A-209ENST00000467124 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
VPS13A-209ENST00000467124 TRAV21A0A0B4J279 112 aa-0.34□□□□□ -2.46
VPS13A-209ENST00000467124 RGPD1P0DJD0 1748 aa-0.34□□□□□ -2.46
VPS13A-209ENST00000467124 WFDC9Q8NEX5 89 aa-0.34□□□□□ -2.46
VPS13A-209ENST00000467124 ATP7BP35670 1465 aa-0.35□□□□□ -2.46
VPS13A-209ENST00000467124 C9orf62Q8N4C0 152 aa-0.35□□□□□ -2.47
VPS13A-209ENST00000467124 STARD9Q9P2P6 4700 aa-0.35□□□□□ -2.47
VPS13A-209ENST00000467124 PLIN4Q96Q06 1357 aa-0.35□□□□□ -2.47
VPS13A-209ENST00000467124 RYR1P21817 5038 aa-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 TTC37Q6PGP7 1564 aa-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 SNRPFP62306 86 aaKnown RBP-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 ALKQ9UM73 1620 aa-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
VPS13A-209ENST00000467124 PCNX1Q96RV3 2341 aa-0.37□□□□□ -2.47
VPS13A-209ENST00000467124 NDUFA3O95167 84 aa-0.37□□□□□ -2.47
VPS13A-209ENST00000467124 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
VPS13A-209ENST00000467124 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
VPS13A-209ENST00000467124 CEBPZOSA8MTT3 80 aa-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 RPL38P63173 70 aaKnown RBP-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 TDRG1Q3Y452 100 aa-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 LINC00643Q86TS7 51 aa-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 EPPK1P58107 5090 aaKnown RBP-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 UBR4Q5T4S7 5183 aa-0.38□□□□□ -2.47
VPS13A-209ENST00000467124 HYDINQ4G0P3 5121 aa-0.39□□□□□ -2.47
VPS13A-209ENST00000467124 QSER1Q2KHR3 1735 aa-0.39□□□□□ -2.47
VPS13A-209ENST00000467124 REV3LO60673 3130 aa-0.4□□□□□ -2.47
VPS13A-209ENST00000467124 KIAA1109Q2LD37 5005 aa-0.4□□□□□ -2.47
VPS13A-209ENST00000467124 LRRC9Q6ZRR7 1453 aa-0.4□□□□□ -2.47
VPS13A-209ENST00000467124 BIRC6Q9NR09 4857 aa-0.4□□□□□ -2.47
VPS13A-209ENST00000467124 PDZD2O15018 2839 aa-0.41□□□□□ -2.47
VPS13A-209ENST00000467124 RYR2Q92736 4967 aa-0.41□□□□□ -2.47
VPS13A-209ENST00000467124 GNG2P59768 71 aa-0.41□□□□□ -2.48
VPS13A-209ENST00000467124 MAP1AP78559 2803 aaPredicted RBP-0.42□□□□□ -2.48
VPS13A-209ENST00000467124 PREX1Q8TCU6 1659 aa-0.42□□□□□ -2.48
VPS13A-209ENST00000467124 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
VPS13A-209ENST00000467124 PKHD1P08F94 4074 aa-0.42□□□□□ -2.48
VPS13A-209ENST00000467124 DNAH6Q9C0G6 4158 aa-0.42□□□□□ -2.48
VPS13A-209ENST00000467124 ABCC3O15438 1527 aa-0.43□□□□□ -2.48
VPS13A-209ENST00000467124 RNF213Q63HN8 5207 aa-0.43□□□□□ -2.48
VPS13A-209ENST00000467124 DNAH3Q8TD57 4116 aa-0.44□□□□□ -2.48
VPS13A-209ENST00000467124 SUPT6HQ7KZ85 1726 aaKnown RBP-0.44□□□□□ -2.48
VPS13A-209ENST00000467124 TMEM131LA2VDJ0 1609 aa-0.44□□□□□ -2.48
VPS13A-209ENST00000467124 RABAC1Q9UI14 185 aa-0.44□□□□□ -2.48
VPS13A-209ENST00000467124 LAMA2P24043 3122 aaKnown RBP-0.44□□□□□ -2.48
VPS13A-209ENST00000467124 KIF14Q15058 1648 aa-0.45□□□□□ -2.48
VPS13A-209ENST00000467124 USP32Q8NFA0 1604 aa-0.45□□□□□ -2.48
VPS13A-209ENST00000467124 MUC17Q685J3 4493 aa-0.45□□□□□ -2.48
VPS13A-209ENST00000467124 NBEAL1Q6ZS30 2694 aa-0.45□□□□□ -2.48
VPS13A-209ENST00000467124 PDE4DIPQ5VU43 2346 aa-0.45□□□□□ -2.48
VPS13A-209ENST00000467124 STAB2Q8WWQ8 2551 aa-0.46□□□□□ -2.48
VPS13A-209ENST00000467124 NF1P21359 2839 aa-0.46□□□□□ -2.48
VPS13A-209ENST00000467124 NCOA2Q15596 1464 aa-0.46□□□□□ -2.48
VPS13A-209ENST00000467124 NBASA2RRP1 2371 aa-0.46□□□□□ -2.48
VPS13A-209ENST00000467124 ZNF831Q5JPB2 1677 aa-0.46□□□□□ -2.48
VPS13A-209ENST00000467124 TNRC18O15417 2968 aaPredicted RBP-0.47□□□□□ -2.48
VPS13A-209ENST00000467124 H0YGG7 62 aa-0.47□□□□□ -2.48
VPS13A-209ENST00000467124 ACYP1P07311 99 aa-0.47□□□□□ -2.48
VPS13A-209ENST00000467124 FAT3Q8TDW7 4589 aa-0.47□□□□□ -2.48
VPS13A-209ENST00000467124 PKHD1L1Q86WI1 4243 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 SMARCA2P51531 1590 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 TGP01266 2768 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 LAMA3Q16787 3333 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 SPRR2EP22531 72 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 VPS13DQ5THJ4 4388 aa-0.48□□□□□ -2.49
VPS13A-209ENST00000467124 PKD1P98161 4303 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 HIVEP1P15822 2718 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 AKAP13Q12802 2813 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 POLR1AO95602 1720 aaPredicted RBP-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 TRANK1O15050 2925 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 CREBBPQ92793 2442 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 KANTRA0A1W2PQU2 76 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 COX6B2Q6YFQ2 88 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 UACAQ9BZF9 1416 aa-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.49□□□□□ -2.49
VPS13A-209ENST00000467124 NDUFB1O75438 58 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 DEFA5Q01523 94 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 ANK3Q12955 4377 aaKnown RBP-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 CICQ96RK0 1608 aaPredicted RBP-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 LTN1O94822 1766 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 DNHD1Q96M86 4753 aa-0.5□□□□□ -2.49
VPS13A-209ENST00000467124 SETD2Q9BYW2 2564 aaPredicted RBP-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 LAMA1P25391 3075 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 RGPD8O14715 1765 aaPredicted RBP-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 SONP18583 2426 aaKnown RBP-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 PLECQ15149 4684 aaKnown RBP-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 ABCA13Q86UQ4 5058 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 DOT1LQ8TEK3 1739 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 RGPD5Q99666 1765 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 MXRA5Q9NR99 2828 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 HECTD1Q9ULT8 2610 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 CUBNO60494 3623 aa-0.51□□□□□ -2.49
VPS13A-209ENST00000467124 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms