RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FREM2Q5SZK8 3169 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 H3BQ15 152 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 DLEU1O43261 78 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 SFTA2Q6UW10 78 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 CDC42BPGQ6DT37 1551 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 NRKQ7Z2Y5 1582 aa-1.14□□□□□ -2.59
LRCH3-211ENST00000466054 MAPKBP1O60336 1514 aa-1.15□□□□□ -2.59
LRCH3-211ENST00000466054 PLEKHH2Q8IVE3 1493 aa-1.15□□□□□ -2.59
LRCH3-211ENST00000466054 A0A087WVE0 104 aa-1.15□□□□□ -2.59
LRCH3-211ENST00000466054 PPP3R1P63098 170 aa-1.15□□□□□ -2.59
LRCH3-211ENST00000466054 SEC11AP67812 179 aa-1.15□□□□□ -2.59
LRCH3-211ENST00000466054 TRAV30A0A087WSZ9 112 aa-1.16□□□□□ -2.6
LRCH3-211ENST00000466054 CCL22O00626 93 aa-1.16□□□□□ -2.6
LRCH3-211ENST00000466054 SMR3BP02814 79 aaPredicted RBP-1.16□□□□□ -2.6
LRCH3-211ENST00000466054 KRTAP19-6Q3LI70 58 aa-1.16□□□□□ -2.6
LRCH3-211ENST00000466054 CLPSL2Q6UWE3 100 aa-1.16□□□□□ -2.6
LRCH3-211ENST00000466054 EIF4G3O43432 1585 aaKnown RBP-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 CDC42BPAQ5VT25 1732 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 H7BZZ5 65 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 I3L3M4 83 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 HEPN1Q6WQI6 88 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 WFDC13Q8IUB5 93 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 ARHGAP5Q13017 1502 aa-1.17□□□□□ -2.6
LRCH3-211ENST00000466054 KIAA1551Q9HCM1 1747 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 NLRP1Q9C000 1473 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 CORTO00230 105 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 CRIPTQ9P021 101 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 CDKN2A-AS1Q9UH64 79 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 NCOA3Q9Y6Q9 1424 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 MYO15AQ9UKN7 3530 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 DMDP11532 3685 aa-1.18□□□□□ -2.6
LRCH3-211ENST00000466054 A0A1B0GV90 55 aa-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 CRYM-AS1A6NIL9 109 aa-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 MRPL34Q9BQ48 92 aaKnown RBP-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 HIGD1BQ9P298 99 aa-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 RGPD2P0DJD1 1756 aa-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 ABCC10Q5T3U5 1492 aa-1.19□□□□□ -2.6
LRCH3-211ENST00000466054 PDCD11Q14690 1871 aaKnown RBP-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 SPHKAPQ2M3C7 1700 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 KRTDAPP60985 99 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 LELP1Q5T871 98 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 LRRC37AA6NMS7 1700 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 C4AP0C0L4 1744 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 C4BP0C0L5 1744 aa-1.2□□□□□ -2.6
LRCH3-211ENST00000466054 VPS13CQ709C8 3753 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 CLIP1P30622 1438 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 EDC4Q6P2E9 1401 aaKnown RBP-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 CRYBG3Q68DQ2 2970 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 FYCO1Q9BQS8 1478 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 CHD1O14646 1710 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 A0A1B0GU69 56 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 PRLHP81277 87 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 KRTAP8-1Q8IUC2 63 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 CGREF1Q99674 301 aa-1.22□□□□□ -2.6
LRCH3-211ENST00000466054 WDFY3Q8IZQ1 3526 aa-1.22□□□□□ -2.61
LRCH3-211ENST00000466054 SPEGQ15772 3267 aa-1.23□□□□□ -2.61
LRCH3-211ENST00000466054 TIAM2Q8IVF5 1701 aa-1.23□□□□□ -2.61
LRCH3-211ENST00000466054 PZPP20742 1482 aa-1.23□□□□□ -2.61
LRCH3-211ENST00000466054 MAGI2Q86UL8 1455 aa-1.23□□□□□ -2.61
LRCH3-211ENST00000466054 TOPAZ1Q8N9V7 1692 aa-1.24□□□□□ -2.61
LRCH3-211ENST00000466054 PREX1Q8TCU6 1659 aa-1.24□□□□□ -2.61
LRCH3-211ENST00000466054 CC2D2AQ9P2K1 1620 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 TNP1P09430 55 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 S100A1P23297 94 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 SNCAP37840 140 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 VAMP8Q9BV40 100 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 UBE2D4Q9Y2X8 147 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 PLXNC1O60486 1568 aa-1.25□□□□□ -2.61
LRCH3-211ENST00000466054 SCN11AQ9UI33 1791 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 ANKRD36A6QL64 1941 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 SPTY2D1-AS1A0A0U1RR47 76 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 TMEM262E9PQX1 116 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 C6orf201Q7Z4U5 140 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 TMEM203Q969S6 136 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 GNG8Q9UK08 70 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 RGPD3A6NKT7 1758 aaPredicted RBP-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 RGPD4Q7Z3J3 1758 aa-1.26□□□□□ -2.61
LRCH3-211ENST00000466054 C7orf77A4D0Y5 90 aa-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 H3BQF6 201 aa-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 DEFB4AO15263 64 aa-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 MRPS10P82664 201 aaKnown RBP-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 NMSQ5H8A3 153 aa-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 CUX1P39880 1505 aa-1.27□□□□□ -2.61
LRCH3-211ENST00000466054 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 COX6B2Q6YFQ2 88 aa-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 DEFB106AQ8N104 65 aa-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 WFDC9Q8NEX5 89 aa-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 C2orf88Q9BSF0 95 aa-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 PSENENQ9NZ42 101 aa-1.28□□□□□ -2.61
LRCH3-211ENST00000466054 RGPD8O14715 1765 aaPredicted RBP-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 RGPD5Q99666 1765 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 CENPEQ02224 2701 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 MAGI3Q5TCQ9 1506 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 CFAP54Q96N23 3096 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 MMP24-AS1A0A0U1RRL7 71 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 MT1FP04733 61 aa-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 TARBP1Q13395 1621 aaKnown RBP-1.29□□□□□ -2.62
LRCH3-211ENST00000466054 ABCC5O15440 1437 aa-1.3□□□□□ -2.62
LRCH3-211ENST00000466054 hADV29S1A0JD25 119 aa-1.3□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms