RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TROQ12816 1431 aaPredicted RBP-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 ATP10BO94823 1461 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 TEP1Q99973 2627 aaKnown RBP-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 UQCRHLA0A096LP55 91 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 D6R8Y8 96 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 MT1AP04731 61 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 MUSTN1Q8IVN3 82 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 VPS13DQ5THJ4 4388 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 TNRC18O15417 2968 aaPredicted RBP-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 USH2AO75445 5202 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 CUBNO60494 3623 aa-0.71□□□□□ -2.52
NUCKS1-202ENST00000464938 VPS8Q8N3P4 1428 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 ANKRD26Q9UPS8 1709 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 ATP7BP35670 1465 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 LEPROTL1O95214 131 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 MT4P47944 62 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 COL5A1-AS1Q5SY13 56 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 COX6B2Q6YFQ2 88 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 MYO3AQ8NEV4 1616 aa-0.72□□□□□ -2.52
NUCKS1-202ENST00000464938 VPS13BQ7Z7G8 4022 aa-0.72□□□□□ -2.53
NUCKS1-202ENST00000464938 RGPD1P0DJD0 1748 aa-0.72□□□□□ -2.53
NUCKS1-202ENST00000464938 RGPD8O14715 1765 aaPredicted RBP-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 RGPD5Q99666 1765 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 LRRC9Q6ZRR7 1453 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 PRRC2CQ9Y520 2896 aaKnown RBP-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 LRRC7Q96NW7 1537 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 COX7BP24311 80 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 FAUP35544 74 aaKnown RBP-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 NMSQ5H8A3 153 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 CEP162Q5TB80 1403 aa-0.73□□□□□ -2.53
NUCKS1-202ENST00000464938 TACC2O95359 2948 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 ANK3Q12955 4377 aaKnown RBP-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 C4AP0C0L4 1744 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 C4BP0C0L5 1744 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 UBR1Q8IWV7 1749 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 NCMAPQ5T1S8 102 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 PDE4DIPQ5VU43 2346 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 HIVEP1P15822 2718 aa-0.74□□□□□ -2.53
NUCKS1-202ENST00000464938 H0YGG7 62 aa-0.75□□□□□ -2.53
NUCKS1-202ENST00000464938 HMGN2P05204 90 aaKnown RBP-0.75□□□□□ -2.53
NUCKS1-202ENST00000464938 APOBP04114 4563 aaKnown RBP-0.75□□□□□ -2.53
NUCKS1-202ENST00000464938 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.75□□□□□ -2.53
NUCKS1-202ENST00000464938 MYH4Q9Y623 1939 aa-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 FASNP49327 2511 aaKnown RBP-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 M0R143 59 aa-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 NDUFA3O95167 84 aa-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 USP32Q8NFA0 1604 aa-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 TIAM2Q8IVF5 1701 aa-0.76□□□□□ -2.53
NUCKS1-202ENST00000464938 SUPT6HQ7KZ85 1726 aaKnown RBP-0.77□□□□□ -2.53
NUCKS1-202ENST00000464938 PLXNC1O60486 1568 aa-0.77□□□□□ -2.53
NUCKS1-202ENST00000464938 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.77□□□□□ -2.53
NUCKS1-202ENST00000464938 NEXMIFQ5QGS0 1516 aa-0.77□□□□□ -2.53
NUCKS1-202ENST00000464938 SNHG12Q9BXW3 62 aa-0.77□□□□□ -2.53
NUCKS1-202ENST00000464938 HTTP42858 3142 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 UBR3Q6ZT12 1888 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 POLR1AO95602 1720 aaPredicted RBP-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 ITPR3Q14573 2671 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 A0A1B0GUT8 65 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 GYPAP02724 150 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 PLGLAQ15195 96 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 C20orf78Q9BR46 151 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 AKAP12Q02952 1782 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 WIZO95785 1651 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 ZZEF1O43149 2961 aa-0.78□□□□□ -2.53
NUCKS1-202ENST00000464938 TMEM131LA2VDJ0 1609 aa-0.78□□□□□ -2.54
NUCKS1-202ENST00000464938 USP9YO00507 2555 aaPredicted RBP-0.79□□□□□ -2.54
NUCKS1-202ENST00000464938 MYO18BQ8IUG5 2567 aa-0.79□□□□□ -2.54
NUCKS1-202ENST00000464938 RPL38P63173 70 aaKnown RBP-0.79□□□□□ -2.54
NUCKS1-202ENST00000464938 DNAH11Q96DT5 4516 aa-0.79□□□□□ -2.54
NUCKS1-202ENST00000464938 ANKRD11Q6UB99 2663 aaPredicted RBP-0.8□□□□□ -2.54
NUCKS1-202ENST00000464938 EPPK1P58107 5090 aaKnown RBP-0.8□□□□□ -2.54
NUCKS1-202ENST00000464938 GAFA1Q96PS6 74 aa-0.8□□□□□ -2.54
NUCKS1-202ENST00000464938 NESP48681 1621 aa-0.8□□□□□ -2.54
NUCKS1-202ENST00000464938 NWD1Q149M9 1564 aa-0.8□□□□□ -2.54
NUCKS1-202ENST00000464938 DMXL1Q9Y485 3027 aa-0.81□□□□□ -2.54
NUCKS1-202ENST00000464938 C9orf92A6NGG3 77 aa-0.81□□□□□ -2.54
NUCKS1-202ENST00000464938 IQCF6A8MYZ5 107 aa-0.81□□□□□ -2.54
NUCKS1-202ENST00000464938 PEA15Q15121 130 aa-0.81□□□□□ -2.54
NUCKS1-202ENST00000464938 ZNF831Q5JPB2 1677 aa-0.81□□□□□ -2.54
NUCKS1-202ENST00000464938 SCN11AQ9UI33 1791 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 TRAV21A0A0B4J279 112 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 H3BNG1 76 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 S100A8P05109 93 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 SMIM11AP58511 58 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 DOT1LQ8TEK3 1739 aa-0.82□□□□□ -2.54
NUCKS1-202ENST00000464938 LTN1O94822 1766 aa-0.83□□□□□ -2.54
NUCKS1-202ENST00000464938 LAMA1P25391 3075 aa-0.83□□□□□ -2.54
NUCKS1-202ENST00000464938 CYB5AP00167 134 aa-0.83□□□□□ -2.54
NUCKS1-202ENST00000464938 PKIAP61925 76 aa-0.83□□□□□ -2.54
NUCKS1-202ENST00000464938 MAP3K1Q13233 1512 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 MAGI3Q5TCQ9 1506 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 DSPP15924 2871 aaKnown RBP-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 GCN1Q92616 2671 aaKnown RBP-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 LCE6AA0A183 80 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 MYMXA0A1B0GTQ4 84 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 RGPD3A6NKT7 1758 aaPredicted RBP-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 RGPD4Q7Z3J3 1758 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms