RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 ZDBF2Q9HCK1 2354 aa2.55□□□□□ -2
SGCE-209ENST00000462731 RANBP2P49792 3224 aaKnown RBP2.55□□□□□ -2
SGCE-209ENST00000462731 LAMA3Q16787 3333 aa2.54□□□□□ -2
SGCE-209ENST00000462731 TNCP24821 2201 aa2.54□□□□□ -2
SGCE-209ENST00000462731 KNTC1P50748 2209 aa2.54□□□□□ -2
SGCE-209ENST00000462731 TJP1Q07157 1748 aa2.54□□□□□ -2
SGCE-209ENST00000462731 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
SGCE-209ENST00000462731 ATP7AQ04656 1500 aa2.53□□□□□ -2
SGCE-209ENST00000462731 FLNBO75369 2602 aaKnown RBP2.53□□□□□ -2
SGCE-209ENST00000462731 ETDCA0A1B0GVM5 59 aa2.53□□□□□ -2
SGCE-209ENST00000462731 CHD6Q8TD26 2715 aa2.53□□□□□ -2
SGCE-209ENST00000462731 CENPFP49454 3210 aa2.53□□□□□ -2.01
SGCE-209ENST00000462731 SAMD9LQ8IVG5 1584 aa2.53□□□□□ -2.01
SGCE-209ENST00000462731 CFAP47Q6ZTR5 3102 aa2.53□□□□□ -2.01
SGCE-209ENST00000462731 USP9XQ93008 2570 aaPredicted RBP2.53□□□□□ -2.01
SGCE-209ENST00000462731 AHCTF1Q8WYP5 2266 aa2.52□□□□□ -2.01
SGCE-209ENST00000462731 TEP1Q99973 2627 aaKnown RBP2.51□□□□□ -2.01
SGCE-209ENST00000462731 NRXN3Q9Y4C0 1643 aa2.51□□□□□ -2.01
SGCE-209ENST00000462731 KRTAP13-1Q8IUC0 172 aa2.51□□□□□ -2.01
SGCE-209ENST00000462731 GOLGA4Q13439 2230 aaKnown RBP2.5□□□□□ -2.01
SGCE-209ENST00000462731 NCOR1O75376 2440 aa2.5□□□□□ -2.01
SGCE-209ENST00000462731 SPTBN4Q9H254 2564 aa2.5□□□□□ -2.01
SGCE-209ENST00000462731 PRUNE2Q8WUY3 3088 aa2.5□□□□□ -2.01
SGCE-209ENST00000462731 IGIPA6NJ69 53 aa2.5□□□□□ -2.01
SGCE-209ENST00000462731 CRIPTQ9P021 101 aa2.5□□□□□ -2.01
SGCE-209ENST00000462731 URB1O60287 2271 aaKnown RBP2.49□□□□□ -2.01
SGCE-209ENST00000462731 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
SGCE-209ENST00000462731 M0R1W7 72 aa2.49□□□□□ -2.01
SGCE-209ENST00000462731 MRPL33O75394 65 aaKnown RBP2.49□□□□□ -2.01
SGCE-209ENST00000462731 ARL14EPLP0DKL9 152 aa2.49□□□□□ -2.01
SGCE-209ENST00000462731 PLNP26678 52 aa2.49□□□□□ -2.01
SGCE-209ENST00000462731 TP53AIP1Q9HCN2 124 aa2.49□□□□□ -2.01
SGCE-209ENST00000462731 TNRC6CQ9HCJ0 1690 aaKnown RBP2.49□□□□□ -2.01
SGCE-209ENST00000462731 ASH1LQ9NR48 2969 aaKnown RBP2.48□□□□□ -2.01
SGCE-209ENST00000462731 I3L2K1 104 aa2.48□□□□□ -2.01
SGCE-209ENST00000462731 LYNX1P0DP58 116 aa2.48□□□□□ -2.01
SGCE-209ENST00000462731 DEFB123Q8N688 67 aa2.48□□□□□ -2.01
SGCE-209ENST00000462731 ANKRD36CQ5JPF3 1778 aa2.48□□□□□ -2.01
SGCE-209ENST00000462731 IQGAP2Q13576 1575 aa2.48□□□□□ -2.01
SGCE-209ENST00000462731 TPRP12270 2363 aaKnown RBP2.47□□□□□ -2.01
SGCE-209ENST00000462731 CNTRLQ7Z7A1 2325 aa2.47□□□□□ -2.01
SGCE-209ENST00000462731 I3L3M4 83 aa2.47□□□□□ -2.01
SGCE-209ENST00000462731 USMG5Q96IX5 58 aa2.47□□□□□ -2.01
SGCE-209ENST00000462731 PTPN13Q12923 2485 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 PIGYQ3MUY2 71 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 CFAP54Q96N23 3096 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 USP34Q70CQ2 3546 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 FAM208BQ5VWN6 2430 aa2.46□□□□□ -2.02
SGCE-209ENST00000462731 MYO18BQ8IUG5 2567 aa2.45□□□□□ -2.02
SGCE-209ENST00000462731 ABRACLQ9P1F3 81 aa2.45□□□□□ -2.02
SGCE-209ENST00000462731 GCN1Q92616 2671 aaKnown RBP2.45□□□□□ -2.02
SGCE-209ENST00000462731 DCHS1Q96JQ0 3298 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 ZNF292O60281 2723 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 DOPEY1Q5JWR5 2465 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 J3QKU1 62 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 CNFNQ9BYD5 112 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 NAV3Q8IVL0 2385 aa2.44□□□□□ -2.02
SGCE-209ENST00000462731 MAP1BP46821 2468 aaKnown RBP2.44□□□□□ -2.02
SGCE-209ENST00000462731 SMIM27A0A1W2PRY6 76 aa2.43□□□□□ -2.02
SGCE-209ENST00000462731 C5orf42Q9H799 3197 aa2.43□□□□□ -2.02
SGCE-209ENST00000462731 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
SGCE-209ENST00000462731 DNHD1Q96M86 4753 aa2.42□□□□□ -2.02
SGCE-209ENST00000462731 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
SGCE-209ENST00000462731 K7EQZ3 153 aa2.42□□□□□ -2.02
SGCE-209ENST00000462731 COX6B1P14854 86 aa2.42□□□□□ -2.02
SGCE-209ENST00000462731 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
SGCE-209ENST00000462731 USP24Q9UPU5 2620 aa2.41□□□□□ -2.02
SGCE-209ENST00000462731 ACACBO00763 2458 aa2.41□□□□□ -2.02
SGCE-209ENST00000462731 CRIP1P50238 77 aa2.4□□□□□ -2.03
SGCE-209ENST00000462731 SPINK9Q5DT21 86 aa2.4□□□□□ -2.03
SGCE-209ENST00000462731 JMJD1CQ15652 2540 aa2.4□□□□□ -2.03
SGCE-209ENST00000462731 CDH23Q9H251 3354 aa2.4□□□□□ -2.03
SGCE-209ENST00000462731 XIRP2A4UGR9 3374 aa2.39□□□□□ -2.03
SGCE-209ENST00000462731 REV3LO60673 3130 aa2.39□□□□□ -2.03
SGCE-209ENST00000462731 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
SGCE-209ENST00000462731 MRPL34Q9BQ48 92 aaKnown RBP2.39□□□□□ -2.03
SGCE-209ENST00000462731 DDX60LQ5H9U9 1706 aaKnown RBP2.39□□□□□ -2.03
SGCE-209ENST00000462731 ABCA12Q86UK0 2595 aa2.39□□□□□ -2.03
SGCE-209ENST00000462731 DNAH14Q0VDD8 3507 aa2.38□□□□□ -2.03
SGCE-209ENST00000462731 ZFYVE26Q68DK2 2539 aa2.38□□□□□ -2.03
SGCE-209ENST00000462731 LINC01546A6NGU7 62 aa2.38□□□□□ -2.03
SGCE-209ENST00000462731 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
SGCE-209ENST00000462731 NCOR2Q9Y618 2525 aa2.37□□□□□ -2.03
SGCE-209ENST00000462731 H0YGX0 51 aa2.37□□□□□ -2.03
SGCE-209ENST00000462731 WDFY4Q6ZS81 3184 aa2.37□□□□□ -2.03
SGCE-209ENST00000462731 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
SGCE-209ENST00000462731 HECTD1Q9ULT8 2610 aa2.37□□□□□ -2.03
SGCE-209ENST00000462731 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 BPTFQ12830 3046 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 SPEGQ15772 3267 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 CCL22O00626 93 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 DNAH12Q6ZR08 3092 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 CEP250Q9BV73 2442 aa2.36□□□□□ -2.03
SGCE-209ENST00000462731 HTTP42858 3142 aa2.35□□□□□ -2.03
SGCE-209ENST00000462731 COX6A2Q02221 97 aa2.35□□□□□ -2.03
SGCE-209ENST00000462731 CACNA1EQ15878 2313 aa2.35□□□□□ -2.03
SGCE-209ENST00000462731 FAM208AQ9UK61 1670 aaKnown RBP2.34□□□□□ -2.03
SGCE-209ENST00000462731 SMG1Q96Q15 3661 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms