RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 WDFY3Q8IZQ1 3526 aa1.15□□□□□ -2.23
CCT4-203ENST00000461540 CACNA1CQ13936 2221 aa1.15□□□□□ -2.23
CCT4-203ENST00000461540 SPTBP11277 2137 aa1.15□□□□□ -2.23
CCT4-203ENST00000461540 ASH1LQ9NR48 2969 aaKnown RBP1.14□□□□□ -2.23
CCT4-203ENST00000461540 NAV2Q8IVL1 2488 aa1.14□□□□□ -2.23
CCT4-203ENST00000461540 NCOA6Q14686 2063 aaPredicted RBP1.14□□□□□ -2.23
CCT4-203ENST00000461540 ZNF462Q96JM2 2506 aa1.14□□□□□ -2.23
CCT4-203ENST00000461540 NMBP08949 121 aa1.14□□□□□ -2.23
CCT4-203ENST00000461540 HMGA1P17096 107 aaKnown RBP1.14□□□□□ -2.23
CCT4-203ENST00000461540 HAMPP81172 84 aa1.14□□□□□ -2.23
CCT4-203ENST00000461540 ETDBQ3ZM63 59 aa1.14□□□□□ -2.23
CCT4-203ENST00000461540 UTP20O75691 2785 aaKnown RBP1.14□□□□□ -2.23
CCT4-203ENST00000461540 SPTAN1Q13813 2472 aaKnown RBP1.14□□□□□ -2.23
CCT4-203ENST00000461540 ASPMQ8IZT6 3477 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 HECTD1Q9ULT8 2610 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 CFAP47Q6ZTR5 3102 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 G3V318 75 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 S100A3P33764 101 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 TMEM263Q8WUH6 116 aaKnown RBP1.13□□□□□ -2.23
CCT4-203ENST00000461540 HIGD1BQ9P298 99 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 SORL1Q92673 2214 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 AHCTF1Q8WYP5 2266 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 LRRK2Q5S007 2527 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 DMXL2Q8TDJ6 3036 aa1.13□□□□□ -2.23
CCT4-203ENST00000461540 USP9YO00507 2555 aaPredicted RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 KNTC1P50748 2209 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 NBASA2RRP1 2371 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 MGAQ8IWI9 3026 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 URB1O60287 2271 aaKnown RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 ARMS2P0C7Q2 107 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 HMGN3Q15651 99 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 Q6JHZ5 121 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 UBE2DNLQ8IWF7 75 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 SPRR4Q96PI1 79 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 LINC00472Q9H8W2 130 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 HRNRQ86YZ3 2850 aaPredicted RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 SPENQ96T58 3664 aaKnown RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 UNC79Q9P2D8 2635 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 BPTFQ12830 3046 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 SPTBN1Q01082 2364 aaKnown RBP1.12□□□□□ -2.23
CCT4-203ENST00000461540 CELSR3Q9NYQ7 3312 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 ATMQ13315 3056 aa1.12□□□□□ -2.23
CCT4-203ENST00000461540 PDZD2O15018 2839 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 F8WEM9 126 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 KALRNO60229 2985 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 ADIRFQ15847 76 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 FDCSPQ8NFU4 85 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 LINC00846Q9NV44 126 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 SPCS1Q9Y6A9 102 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 ABCA2Q9BZC7 2435 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 ABCA12Q86UK0 2595 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 ITPR2Q14571 2701 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 DOPEY1Q5JWR5 2465 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 FLNBO75369 2602 aaKnown RBP1.11□□□□□ -2.23
CCT4-203ENST00000461540 TEP1Q99973 2627 aaKnown RBP1.11□□□□□ -2.23
CCT4-203ENST00000461540 MED13LQ71F56 2210 aa1.11□□□□□ -2.23
CCT4-203ENST00000461540 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
CCT4-203ENST00000461540 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 SMG1Q96Q15 3661 aaKnown RBP1.1□□□□□ -2.23
CCT4-203ENST00000461540 LOC400499M0QZD8 3231 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 ANKRD17O75179 2603 aaKnown RBP1.1□□□□□ -2.23
CCT4-203ENST00000461540 PCNX1Q96RV3 2341 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 A0A087WVE0 104 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 KANTRA0A1W2PQU2 76 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 H3BQF6 201 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 LEPROTL1O95214 131 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 SNRPFP62306 86 aaKnown RBP1.1□□□□□ -2.23
CCT4-203ENST00000461540 TDRG1Q3Y452 100 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 ALKAL2Q6UX46 152 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 U3KQA8 63 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 MYO9AB2RTY4 2548 aa1.1□□□□□ -2.23
CCT4-203ENST00000461540 BSNQ9UPA5 3926 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 TEX15Q9BXT5 2789 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 D6R8Y8 96 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 HMGN2P05204 90 aaKnown RBP1.09□□□□□ -2.23
CCT4-203ENST00000461540 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
CCT4-203ENST00000461540 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 MUSTN1Q8IVN3 82 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 DEFB124Q8NES8 71 aa1.09□□□□□ -2.23
CCT4-203ENST00000461540 LAMA5O15230 3695 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 SPTA1P02549 2419 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 NBPF19A0A087WUL8 3843 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 LRBAP50851 2863 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 CENPEQ02224 2701 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 FBN2P35556 2912 aa1.09□□□□□ -2.24
CCT4-203ENST00000461540 POLQO75417 2590 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 APCP25054 2843 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 DNAJC13O75165 2243 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 BOD1L1Q8NFC6 3051 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 ITPR3Q14573 2671 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 NSD1Q96L73 2696 aaPredicted RBP1.08□□□□□ -2.24
CCT4-203ENST00000461540 CNTRLQ7Z7A1 2325 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 TRBV6-1A0A0K0K1D8 114 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 ACYP1P07311 99 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 GNGT1P63211 74 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 C10orf113Q5VZT2 155 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 ST20Q9HBF5 79 aa1.08□□□□□ -2.24
CCT4-203ENST00000461540 PSENENQ9NZ42 101 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms