RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TIAM2Q8IVF5 1701 aa-0.27□□□□□ -2.45
VCL-203ENST00000461383 TTC37Q6PGP7 1564 aa-0.27□□□□□ -2.45
VCL-203ENST00000461383 ATP7BP35670 1465 aa-0.27□□□□□ -2.45
VCL-203ENST00000461383 PPLO60437 1756 aa-0.27□□□□□ -2.45
VCL-203ENST00000461383 PLIN4Q96Q06 1357 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 MYMXA0A1B0GTQ4 84 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 PVALEFA0A1B0GWK0 134 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 K7EP34 96 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 SNRPFP62306 86 aaKnown RBP-0.28□□□□□ -2.45
VCL-203ENST00000461383 WFDC9Q8NEX5 89 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 ABCC3O15438 1527 aa-0.28□□□□□ -2.45
VCL-203ENST00000461383 SRRM2Q9UQ35 2752 aaKnown RBP-0.28□□□□□ -2.46
VCL-203ENST00000461383 REV3LO60673 3130 aa-0.29□□□□□ -2.46
VCL-203ENST00000461383 H0YGG7 62 aa-0.29□□□□□ -2.46
VCL-203ENST00000461383 MUC2Q02817 5179 aa-0.29□□□□□ -2.46
VCL-203ENST00000461383 TRAV21A0A0B4J279 112 aa-0.3□□□□□ -2.46
VCL-203ENST00000461383 COX6B2Q6YFQ2 88 aa-0.3□□□□□ -2.46
VCL-203ENST00000461383 LINC00643Q86TS7 51 aa-0.3□□□□□ -2.46
VCL-203ENST00000461383 STAB2Q8WWQ8 2551 aa-0.3□□□□□ -2.46
VCL-203ENST00000461383 CEBPZOSA8MTT3 80 aa-0.31□□□□□ -2.46
VCL-203ENST00000461383 POLR1AO95602 1720 aaPredicted RBP-0.31□□□□□ -2.46
VCL-203ENST00000461383 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
VCL-203ENST00000461383 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
VCL-203ENST00000461383 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.32□□□□□ -2.46
VCL-203ENST00000461383 NDUFB1O75438 58 aa-0.32□□□□□ -2.46
VCL-203ENST00000461383 ACYP1P07311 99 aa-0.32□□□□□ -2.46
VCL-203ENST00000461383 RABAC1Q9UI14 185 aa-0.32□□□□□ -2.46
VCL-203ENST00000461383 NBEAL1Q6ZS30 2694 aa-0.32□□□□□ -2.46
VCL-203ENST00000461383 KIF14Q15058 1648 aa-0.33□□□□□ -2.46
VCL-203ENST00000461383 NDUFA3O95167 84 aa-0.33□□□□□ -2.46
VCL-203ENST00000461383 MAP1AP78559 2803 aaPredicted RBP-0.33□□□□□ -2.46
VCL-203ENST00000461383 TMEM131LA2VDJ0 1609 aa-0.34□□□□□ -2.46
VCL-203ENST00000461383 MAP3K4Q9Y6R4 1608 aa-0.34□□□□□ -2.46
VCL-203ENST00000461383 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.46
VCL-203ENST00000461383 SVEP1Q4LDE5 3571 aa-0.35□□□□□ -2.47
VCL-203ENST00000461383 KANTRA0A1W2PQU2 76 aa-0.35□□□□□ -2.47
VCL-203ENST00000461383 KRTAP19-7Q3SYF9 63 aa-0.35□□□□□ -2.47
VCL-203ENST00000461383 SETD2Q9BYW2 2564 aaPredicted RBP-0.36□□□□□ -2.47
VCL-203ENST00000461383 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
VCL-203ENST00000461383 PTPN23Q9H3S7 1636 aa-0.37□□□□□ -2.47
VCL-203ENST00000461383 DOT1LQ8TEK3 1739 aa-0.37□□□□□ -2.47
VCL-203ENST00000461383 SPRR2AP35326 72 aa-0.37□□□□□ -2.47
VCL-203ENST00000461383 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
VCL-203ENST00000461383 DSTQ03001 7570 aaKnown RBP-0.38□□□□□ -2.47
VCL-203ENST00000461383 URB2Q14146 1524 aaKnown RBP-0.38□□□□□ -2.47
VCL-203ENST00000461383 SPTBN4Q9H254 2564 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 NWD1Q149M9 1564 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
VCL-203ENST00000461383 TRANK1O15050 2925 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 NESP48681 1621 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 UACAQ9BZF9 1416 aa-0.38□□□□□ -2.47
VCL-203ENST00000461383 GNG2P59768 71 aa-0.39□□□□□ -2.47
VCL-203ENST00000461383 PRO3102Q9H379 93 aa-0.39□□□□□ -2.47
VCL-203ENST00000461383 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 PDZD2O15018 2839 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 NCOA2Q15596 1464 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 C3orf79P0CE67 100 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 IFI27P40305 119 aaPredicted RBP-0.4□□□□□ -2.47
VCL-203ENST00000461383 KRTAP6-2Q3LI66 62 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 CREBBPQ92793 2442 aa-0.4□□□□□ -2.47
VCL-203ENST00000461383 USP32Q8NFA0 1604 aa-0.41□□□□□ -2.47
VCL-203ENST00000461383 UMAD1C9J7I0 102 aa-0.41□□□□□ -2.48
VCL-203ENST00000461383 PIK3C2BO00750 1634 aa-0.42□□□□□ -2.48
VCL-203ENST00000461383 TDRG1Q3Y452 100 aa-0.42□□□□□ -2.48
VCL-203ENST00000461383 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.42□□□□□ -2.48
VCL-203ENST00000461383 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
VCL-203ENST00000461383 LINC00158P58513 81 aa-0.43□□□□□ -2.48
VCL-203ENST00000461383 ADIRFQ15847 76 aa-0.43□□□□□ -2.48
VCL-203ENST00000461383 DDX60LQ5H9U9 1706 aaKnown RBP-0.44□□□□□ -2.48
VCL-203ENST00000461383 SCN11AQ9UI33 1791 aa-0.44□□□□□ -2.48
VCL-203ENST00000461383 HECTD1Q9ULT8 2610 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 A0A087WXM4 84 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 S100A13Q99584 98 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 ST20Q9HBF5 79 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 MAGI3Q5TCQ9 1506 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 MUC12Q9UKN1 5478 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 TGP01266 2768 aa-0.45□□□□□ -2.48
VCL-203ENST00000461383 AKAP13Q12802 2813 aa-0.46□□□□□ -2.48
VCL-203ENST00000461383 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
VCL-203ENST00000461383 ATP5EP2Q5VTU8 51 aa-0.46□□□□□ -2.48
VCL-203ENST00000461383 SMARCA2P51531 1590 aa-0.46□□□□□ -2.48
VCL-203ENST00000461383 TNRC18O15417 2968 aaPredicted RBP-0.46□□□□□ -2.48
VCL-203ENST00000461383 LYSTQ99698 3801 aa-0.46□□□□□ -2.48
VCL-203ENST00000461383 RB1CC1Q8TDY2 1594 aa-0.47□□□□□ -2.48
VCL-203ENST00000461383 IFI6P09912 130 aa-0.47□□□□□ -2.48
VCL-203ENST00000461383 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
VCL-203ENST00000461383 PRRC2CQ9Y520 2896 aaKnown RBP-0.47□□□□□ -2.48
VCL-203ENST00000461383 EPG5Q9HCE0 2579 aa-0.47□□□□□ -2.48
VCL-203ENST00000461383 PKD1P98161 4303 aa-0.47□□□□□ -2.49
VCL-203ENST00000461383 MXRA5Q9NR99 2828 aa-0.48□□□□□ -2.49
VCL-203ENST00000461383 PLCH1Q4KWH8 1693 aa-0.48□□□□□ -2.49
VCL-203ENST00000461383 DEFA5Q01523 94 aa-0.48□□□□□ -2.49
VCL-203ENST00000461383 NF1P21359 2839 aa-0.48□□□□□ -2.49
VCL-203ENST00000461383 CCDC88BA6NC98 1476 aa-0.48□□□□□ -2.49
VCL-203ENST00000461383 PLXNC1O60486 1568 aa-0.49□□□□□ -2.49
VCL-203ENST00000461383 CFAP43Q8NDM7 1665 aa-0.49□□□□□ -2.49
VCL-203ENST00000461383 H3BNG1 76 aa-0.49□□□□□ -2.49
VCL-203ENST00000461383 NDUFA4O00483 81 aa-0.49□□□□□ -2.49
VCL-203ENST00000461383 NREPQ16612 68 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms