RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
SPTLC1-203ENST00000461132 ZFHX3Q15911 3703 aa0.62□□□□□ -2.31
SPTLC1-203ENST00000461132 APCP25054 2843 aa0.62□□□□□ -2.31
SPTLC1-203ENST00000461132 ENHOQ6UWT2 76 aa0.61□□□□□ -2.31
SPTLC1-203ENST00000461132 ZNF292O60281 2723 aa0.6□□□□□ -2.31
SPTLC1-203ENST00000461132 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
SPTLC1-203ENST00000461132 TNRC6CQ9HCJ0 1690 aaKnown RBP0.6□□□□□ -2.31
SPTLC1-203ENST00000461132 A0A087WWC5 75 aa0.6□□□□□ -2.31
SPTLC1-203ENST00000461132 S100ZQ8WXG8 99 aa0.6□□□□□ -2.31
SPTLC1-203ENST00000461132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.311e-8■■■■□ 22.6
SPTLC1-203ENST00000461132 PIEZO1Q92508 2521 aa0.59□□□□□ -2.31
SPTLC1-203ENST00000461132 DEFB131BA0A096LNP1 70 aa0.59□□□□□ -2.31
SPTLC1-203ENST00000461132 NESP48681 1621 aa0.59□□□□□ -2.32
SPTLC1-203ENST00000461132 EFCAB5A4FU69 1503 aa0.59□□□□□ -2.32
SPTLC1-203ENST00000461132 DNMBPQ6XZF7 1577 aa0.58□□□□□ -2.32
SPTLC1-203ENST00000461132 IGF2RP11717 2491 aa0.58□□□□□ -2.32
SPTLC1-203ENST00000461132 LINC00158P58513 81 aa0.58□□□□□ -2.32
SPTLC1-203ENST00000461132 KCNQ1DNQ9H478 68 aa0.58□□□□□ -2.32
SPTLC1-203ENST00000461132 ASXL1Q8IXJ9 1541 aa0.58□□□□□ -2.32
SPTLC1-203ENST00000461132 CNOT1A5YKK6 2376 aaKnown RBP0.57□□□□□ -2.32
SPTLC1-203ENST00000461132 PLCH1Q4KWH8 1693 aa0.57□□□□□ -2.32
SPTLC1-203ENST00000461132 ZC3H13Q5T200 1668 aaKnown RBP0.57□□□□□ -2.32
SPTLC1-203ENST00000461132 RICTORQ6R327 1708 aa0.57□□□□□ -2.32
SPTLC1-203ENST00000461132 CDC42BPGQ6DT37 1551 aa0.57□□□□□ -2.32
SPTLC1-203ENST00000461132 DDX60LQ5H9U9 1706 aaKnown RBP0.56□□□□□ -2.32
SPTLC1-203ENST00000461132 LELP1Q5T871 98 aa0.56□□□□□ -2.32
SPTLC1-203ENST00000461132 DIP2AQ14689 1571 aa0.56□□□□□ -2.32
SPTLC1-203ENST00000461132 EIF2AK4Q9P2K8 1649 aaKnown RBP0.56□□□□□ -2.32
SPTLC1-203ENST00000461132 ERICH3Q5RHP9 1530 aa0.55□□□□□ -2.32
SPTLC1-203ENST00000461132 GVINP1Q7Z2Y8 2422 aa0.55□□□□□ -2.32
SPTLC1-203ENST00000461132 ADAMTS12P58397 1594 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 THOC2Q8NI27 1593 aaKnown RBP0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 MROH1Q8NDA8 1641 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 CICQ96RK0 1608 aaPredicted RBP0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 NHSQ6T4R5 1651 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 ETDCA0A1B0GVM5 59 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 ZFYVE26Q68DK2 2539 aa0.54□□□□□ -2.32
SPTLC1-203ENST00000461132 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
SPTLC1-203ENST00000461132 SMIM5Q71RC9 77 aa0.53□□□□□ -2.32
SPTLC1-203ENST00000461132 CHD9Q3L8U1 2897 aa0.53□□□□□ -2.32
SPTLC1-203ENST00000461132 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.33
SPTLC1-203ENST00000461132 ABCA9Q8IUA7 1624 aa0.53□□□□□ -2.33
SPTLC1-203ENST00000461132 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
SPTLC1-203ENST00000461132 NAV2Q8IVL1 2488 aa0.52□□□□□ -2.33
SPTLC1-203ENST00000461132 LINC01549A6NIU2 74 aa0.52□□□□□ -2.33
SPTLC1-203ENST00000461132 M0R2T5 61 aa0.52□□□□□ -2.33
SPTLC1-203ENST00000461132 DEFB114Q30KQ6 69 aa0.52□□□□□ -2.33
SPTLC1-203ENST00000461132 WIZO95785 1651 aa0.51□□□□□ -2.33
SPTLC1-203ENST00000461132 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
SPTLC1-203ENST00000461132 C4AP0C0L4 1744 aa0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 C4BP0C0L5 1744 aa0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 INO80Q9ULG1 1556 aaPredicted RBP0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 H0YGG7 62 aa0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 DEFB135Q30KP9 77 aa0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 PARP4Q9UKK3 1724 aaKnown RBP0.5□□□□□ -2.33
SPTLC1-203ENST00000461132 PTPN13Q12923 2485 aa0.49□□□□□ -2.33
SPTLC1-203ENST00000461132 DEPDC5O75140 1603 aa0.49□□□□□ -2.33
SPTLC1-203ENST00000461132 SERF2P84101 59 aa0.49□□□□□ -2.33
SPTLC1-203ENST00000461132 SPTA1P02549 2419 aa0.49□□□□□ -2.33
SPTLC1-203ENST00000461132 MADDQ8WXG6 1647 aa0.49□□□□□ -2.33
SPTLC1-203ENST00000461132 NCOR1O75376 2440 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 UNC79Q9P2D8 2635 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 ITSN1Q15811 1721 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 NRAPQ86VF7 1730 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 K7EMI3 77 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 CRIP1P50238 77 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 TENM4Q6N022 2769 aa0.48□□□□□ -2.33
SPTLC1-203ENST00000461132 SFTA3P0C7M3 94 aa0.47□□□□□ -2.33
SPTLC1-203ENST00000461132 NCBP2-AS2Q69YL0 99 aa0.47□□□□□ -2.33
SPTLC1-203ENST00000461132 TJP1Q07157 1748 aa0.47□□□□□ -2.33
SPTLC1-203ENST00000461132 CCDC180Q9P1Z9 1646 aa0.46□□□□□ -2.34
SPTLC1-203ENST00000461132 H0YAA0 97 aa0.46□□□□□ -2.34
SPTLC1-203ENST00000461132 PLXNC1O60486 1568 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 ABCA2Q9BZC7 2435 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 IAPPP10997 89 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 NMES1Q9C002 83 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 NCOR2Q9Y618 2525 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
SPTLC1-203ENST00000461132 KNL1Q8NG31 2342 aa0.44□□□□□ -2.34
SPTLC1-203ENST00000461132 VWFP04275 2813 aa0.44□□□□□ -2.34
SPTLC1-203ENST00000461132 OTOGQ6ZRI0 2925 aa0.44□□□□□ -2.34
SPTLC1-203ENST00000461132 PRM1P04553 51 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 FCER1GP30273 86 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 MINOS1Q5TGZ0 78 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 ABCC6O95255 1503 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 KIAA0586Q9BVV6 1533 aa0.43□□□□□ -2.34
SPTLC1-203ENST00000461132 RNF17Q9BXT8 1623 aaKnown RBP0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 PDE4DIPQ5VU43 2346 aa0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 DEFB130BP0DP73 79 aa0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 DEFB130AP0DP74 79 aa0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 CHD8Q9HCK8 2581 aa0.42□□□□□ -2.34
SPTLC1-203ENST00000461132 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.35
SPTLC1-203ENST00000461132 HIVEP3Q5T1R4 2406 aa0.4□□□□□ -2.35
SPTLC1-203ENST00000461132 ATRQ13535 2644 aa0.39□□□□□ -2.35
SPTLC1-203ENST00000461132 TIAM1Q13009 1591 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms