RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PSORS1C2Q9UIG4 136 aa13.36□□□□□ -0.27
C9orf3-208ENST00000451893 HMCN2Q8NDA2 5059 aa13.35□□□□□ -0.27
C9orf3-208ENST00000451893 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
C9orf3-208ENST00000451893 A0A1B0GV90 55 aa13.34□□□□□ -0.27
C9orf3-208ENST00000451893 TSPAN13O95857 204 aa13.34□□□□□ -0.27
C9orf3-208ENST00000451893 LYRM7Q5U5X0 104 aa13.34□□□□□ -0.27
C9orf3-208ENST00000451893 IGKV2-28A0A075B6P5 120 aa13.33□□□□□ -0.28
C9orf3-208ENST00000451893 A0A1W2PPM0 123 aa13.33□□□□□ -0.28
C9orf3-208ENST00000451893 IGKV2D-28P01615 120 aa13.33□□□□□ -0.28
C9orf3-208ENST00000451893 FABP2P12104 132 aa13.33□□□□□ -0.28
C9orf3-208ENST00000451893 UBE2BP63146 152 aa13.33□□□□□ -0.28
C9orf3-208ENST00000451893 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
C9orf3-208ENST00000451893 FAM168BA1KXE4 195 aa13.31□□□□□ -0.28
C9orf3-208ENST00000451893 Q1RN00 199 aa13.31□□□□□ -0.28
C9orf3-208ENST00000451893 XAGE1AQ9HD64 81 aa13.3□□□□□ -0.28
C9orf3-208ENST00000451893 COX6CP09669 75 aa13.29□□□□□ -0.28
C9orf3-208ENST00000451893 VAMP3Q15836 100 aa13.29□□□□□ -0.28
C9orf3-208ENST00000451893 LINC00337Q8N6G1 96 aa13.29□□□□□ -0.28
C9orf3-208ENST00000451893 TMEM126AQ9H061 195 aa13.29□□□□□ -0.28
C9orf3-208ENST00000451893 M0QXV9 152 aa13.28□□□□□ -0.28
C9orf3-208ENST00000451893 PSMB2P49721 201 aa13.27□□□□□ -0.29
C9orf3-208ENST00000451893 DIRC1Q969H9 104 aa13.27□□□□□ -0.29
C9orf3-208ENST00000451893 CBY1Q9Y3M2 126 aa13.27□□□□□ -0.29
C9orf3-208ENST00000451893 H7C2G1 150 aa13.26□□□□□ -0.29
C9orf3-208ENST00000451893 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
C9orf3-208ENST00000451893 OR13C6PQ8NH95 151 aa13.26□□□□□ -0.29
C9orf3-208ENST00000451893 IGLV7-43P04211 117 aa13.25□□□□□ -0.29
C9orf3-208ENST00000451893 VPREB1P12018 145 aa13.25□□□□□ -0.29
C9orf3-208ENST00000451893 RPL28P46779 137 aaKnown RBP13.25□□□□□ -0.29
C9orf3-208ENST00000451893 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
C9orf3-208ENST00000451893 NAA38Q9BRA0 125 aaKnown RBP13.25□□□□□ -0.29
C9orf3-208ENST00000451893 TRBV20-1A0A075B6N2 111 aa13.24□□□□□ -0.29
C9orf3-208ENST00000451893 M0R378 163 aa13.24□□□□□ -0.29
C9orf3-208ENST00000451893 SCGB1C2P0DMR2 95 aa13.24□□□□□ -0.29
C9orf3-208ENST00000451893 S100A7L2Q5SY68 101 aa13.24□□□□□ -0.29
C9orf3-208ENST00000451893 IGLV5-37A0A075B6J1 123 aa13.23□□□□□ -0.29
C9orf3-208ENST00000451893 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
C9orf3-208ENST00000451893 KRTAP10-8P60410 259 aa13.23□□□□□ -0.29
C9orf3-208ENST00000451893 SPCS1Q9Y6A9 102 aa13.22□□□□□ -0.29
C9orf3-208ENST00000451893 K7EP34 96 aa13.21□□□□□ -0.29
C9orf3-208ENST00000451893 Q8NDZ9 215 aa13.21□□□□□ -0.29
C9orf3-208ENST00000451893 NCR3O14931 201 aa13.2□□□□□ -0.3
C9orf3-208ENST00000451893 TRIAP1O43715 76 aa13.2□□□□□ -0.3
C9orf3-208ENST00000451893 IGLV6-57P01721 117 aa13.2□□□□□ -0.3
C9orf3-208ENST00000451893 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
C9orf3-208ENST00000451893 NKAPP1Q8N9T2 125 aa13.2□□□□□ -0.3
C9orf3-208ENST00000451893 H0YGX0 51 aa13.18□□□□□ -0.3
C9orf3-208ENST00000451893 SMIM11BQ8TCY0 68 aa13.18□□□□□ -0.3
C9orf3-208ENST00000451893 TNXBP22105 4242 aa13.18□□□□□ -0.3
C9orf3-208ENST00000451893 UBR4Q5T4S7 5183 aa13.17□□□□□ -0.3
C9orf3-208ENST00000451893 H0Y9J4 135 aa13.17□□□□□ -0.3
C9orf3-208ENST00000451893 KRTAP11-1Q8IUC1 163 aa13.15□□□□□ -0.3
C9orf3-208ENST00000451893 ATXN8Q156A1 80 aa13.13□□□□□ -0.31
C9orf3-208ENST00000451893 PRR26Q8N8Z3 221 aa13.13□□□□□ -0.31
C9orf3-208ENST00000451893 TRBV10-3A0A0K0K1G6 114 aa13.12□□□□□ -0.31
C9orf3-208ENST00000451893 KRTAP7-1Q8IUC3 87 aa13.12□□□□□ -0.31
C9orf3-208ENST00000451893 TCL1BO95988 128 aa13.11□□□□□ -0.31
C9orf3-208ENST00000451893 C22orf24Q9Y442 160 aa13.11□□□□□ -0.31
C9orf3-208ENST00000451893 TRAV23DV6A0A075B6W5 121 aa13.1□□□□□ -0.31
C9orf3-208ENST00000451893 TRBV7-6A0A0J9YX20 115 aa13.1□□□□□ -0.31
C9orf3-208ENST00000451893 MRPL55Q7Z7F7 128 aaKnown RBP13.09□□□□□ -0.31
C9orf3-208ENST00000451893 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
C9orf3-208ENST00000451893 LST1O00453 97 aa13.08□□□□□ -0.32
C9orf3-208ENST00000451893 SNCGO76070 127 aa13.08□□□□□ -0.32
C9orf3-208ENST00000451893 KCNQ1DNQ9H478 68 aa13.08□□□□□ -0.32
C9orf3-208ENST00000451893 A0A1B0GX51 115 aa13.07□□□□□ -0.32
C9orf3-208ENST00000451893 H3BMG7 143 aa13.07□□□□□ -0.32
C9orf3-208ENST00000451893 TRACP01848 142 aa13.06□□□□□ -0.32
C9orf3-208ENST00000451893 F8W1H4 67 aa13.05□□□□□ -0.32
C9orf3-208ENST00000451893 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-208ENST00000451893 C6orf99Q4VX62 202 aa13.05□□□□□ -0.32
C9orf3-208ENST00000451893 LINC00167Q96N53 147 aa13.05□□□□□ -0.32
C9orf3-208ENST00000451893 PRYO14603 147 aa13.04□□□□□ -0.32
C9orf3-208ENST00000451893 ZNF861PO60384 105 aa13.04□□□□□ -0.32
C9orf3-208ENST00000451893 CLEC2BQ92478 149 aa13.03□□□□□ -0.32
C9orf3-208ENST00000451893 RPL37AP8A6NKH3 93 aa13□□□□□ -0.33
C9orf3-208ENST00000451893 COX7BP24311 80 aa12.99□□□□□ -0.33
C9orf3-208ENST00000451893 LRP2P98164 4655 aa12.97□□□□□ -0.33
C9orf3-208ENST00000451893 BCE1O60756 84 aa12.97□□□□□ -0.33
C9orf3-208ENST00000451893 KRTAP1-4P0C5Y4 121 aa12.97□□□□□ -0.33
C9orf3-208ENST00000451893 SPRR1AP35321 89 aa12.97□□□□□ -0.33
C9orf3-208ENST00000451893 ELOF1P60002 83 aaKnown RBP12.97□□□□□ -0.33
C9orf3-208ENST00000451893 LINC00575Q6W349 94 aa12.97□□□□□ -0.33
C9orf3-208ENST00000451893 SLC25A20O43772 301 aa12.96□□□□□ -0.33
C9orf3-208ENST00000451893 DNAL4O96015 105 aa12.96□□□□□ -0.33
C9orf3-208ENST00000451893 UBE2AP49459 152 aa12.96□□□□□ -0.33
C9orf3-208ENST00000451893 FAM218AQ96MZ4 157 aa12.96□□□□□ -0.33
C9orf3-208ENST00000451893 PRO0461Q9UI25 63 aa12.96□□□□□ -0.33
C9orf3-208ENST00000451893 C9JAW5 83 aa12.95□□□□□ -0.34
C9orf3-208ENST00000451893 H3BT86 120 aa12.94□□□□□ -0.34
C9orf3-208ENST00000451893 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
C9orf3-208ENST00000451893 H3BQ85 93 aa12.93□□□□□ -0.34
C9orf3-208ENST00000451893 ETDCA0A1B0GVM5 59 aa12.92□□□□□ -0.34
C9orf3-208ENST00000451893 GHRHP01286 108 aa12.92□□□□□ -0.34
C9orf3-208ENST00000451893 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-208ENST00000451893 PRR4Q16378 134 aa12.91□□□□□ -0.34
C9orf3-208ENST00000451893 ANKRD29Q8N6D5 301 aa12.9□□□□□ -0.34
C9orf3-208ENST00000451893 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
C9orf3-208ENST00000451893 B5MCH6 92 aa12.88□□□□□ -0.35
C9orf3-208ENST00000451893 CRYGAP11844 174 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms