RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TAL2Q16559 108 aa8.37□□□□□ -1.07
PDLIM2-213ENST00000448520 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
PDLIM2-213ENST00000448520 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
PDLIM2-213ENST00000448520 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
PDLIM2-213ENST00000448520 UBE2BP63146 152 aa8.36□□□□□ -1.07
PDLIM2-213ENST00000448520 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
PDLIM2-213ENST00000448520 PPDPFQ9H3Y8 114 aa8.36□□□□□ -1.07
PDLIM2-213ENST00000448520 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
PDLIM2-213ENST00000448520 DIRC1Q969H9 104 aa8.35□□□□□ -1.07
PDLIM2-213ENST00000448520 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
PDLIM2-213ENST00000448520 OR13C6PQ8NH95 151 aa8.34□□□□□ -1.07
PDLIM2-213ENST00000448520 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
PDLIM2-213ENST00000448520 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
PDLIM2-213ENST00000448520 HINT1P49773 126 aaPredicted RBP8.32□□□□□ -1.08
PDLIM2-213ENST00000448520 S100A7L2Q5SY68 101 aa8.32□□□□□ -1.08
PDLIM2-213ENST00000448520 A6NDN8 102 aa8.31□□□□□ -1.08
PDLIM2-213ENST00000448520 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
PDLIM2-213ENST00000448520 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
PDLIM2-213ENST00000448520 CFC1P0CG37 223 aa8.31□□□□□ -1.08
PDLIM2-213ENST00000448520 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
PDLIM2-213ENST00000448520 K7ERJ3 54 aa8.3□□□□□ -1.08
PDLIM2-213ENST00000448520 H0Y9J4 135 aa8.29□□□□□ -1.08
PDLIM2-213ENST00000448520 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
PDLIM2-213ENST00000448520 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
PDLIM2-213ENST00000448520 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
PDLIM2-213ENST00000448520 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
PDLIM2-213ENST00000448520 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 TRAV13-2A0A0B4J235 113 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 A6NJY4 79 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 H7C2G1 150 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 PRYO14603 147 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 RAB37Q96AX2 223 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
PDLIM2-213ENST00000448520 BATFQ16520 125 aa8.26□□□□□ -1.09
PDLIM2-213ENST00000448520 M0R143 59 aa8.25□□□□□ -1.09
PDLIM2-213ENST00000448520 PRLHP81277 87 aa8.25□□□□□ -1.09
PDLIM2-213ENST00000448520 SMIM11BQ8TCY0 68 aa8.25□□□□□ -1.09
PDLIM2-213ENST00000448520 KRTAP4-16G5E9R7 235 aaPredicted RBP8.24□□□□□ -1.09
PDLIM2-213ENST00000448520 BCE1O60756 84 aa8.24□□□□□ -1.09
PDLIM2-213ENST00000448520 SPRR1AP35321 89 aa8.24□□□□□ -1.09
PDLIM2-213ENST00000448520 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
PDLIM2-213ENST00000448520 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
PDLIM2-213ENST00000448520 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
PDLIM2-213ENST00000448520 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
PDLIM2-213ENST00000448520 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
PDLIM2-213ENST00000448520 LPAP08519 4548 aa8.23□□□□□ -1.09
PDLIM2-213ENST00000448520 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
PDLIM2-213ENST00000448520 ETDCA0A1B0GVM5 59 aa8.21□□□□□ -1.1
PDLIM2-213ENST00000448520 UBE2AP49459 152 aa8.21□□□□□ -1.1
PDLIM2-213ENST00000448520 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
PDLIM2-213ENST00000448520 B5MCH6 92 aa8.2□□□□□ -1.1
PDLIM2-213ENST00000448520 Q1RN00 199 aa8.2□□□□□ -1.1
PDLIM2-213ENST00000448520 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
PDLIM2-213ENST00000448520 ZNF861PO60384 105 aa8.19□□□□□ -1.1
PDLIM2-213ENST00000448520 TSPAN13O95857 204 aa8.19□□□□□ -1.1
PDLIM2-213ENST00000448520 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
PDLIM2-213ENST00000448520 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
PDLIM2-213ENST00000448520 COX7BP24311 80 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 PRR4Q16378 134 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 Q6ZRX8 168 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 Q9BRP9 147 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 HIGD2AQ9BW72 106 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 CBY1Q9Y3M2 126 aa8.17□□□□□ -1.1
PDLIM2-213ENST00000448520 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
PDLIM2-213ENST00000448520 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
PDLIM2-213ENST00000448520 TRIAP1O43715 76 aa8.15□□□□□ -1.1
PDLIM2-213ENST00000448520 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
PDLIM2-213ENST00000448520 A0A1B0GV90 55 aa8.13□□□□□ -1.11
PDLIM2-213ENST00000448520 PSMB2P49721 201 aa8.13□□□□□ -1.11
PDLIM2-213ENST00000448520 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
PDLIM2-213ENST00000448520 TAX1BP3O14907 124 aa8.12□□□□□ -1.11
PDLIM2-213ENST00000448520 COL5A1-AS1Q5SY13 56 aa8.12□□□□□ -1.11
PDLIM2-213ENST00000448520 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
PDLIM2-213ENST00000448520 CLEC2BQ92478 149 aa8.11□□□□□ -1.11
PDLIM2-213ENST00000448520 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
PDLIM2-213ENST00000448520 VAMP3Q15836 100 aa8.1□□□□□ -1.11
PDLIM2-213ENST00000448520 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
PDLIM2-213ENST00000448520 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
PDLIM2-213ENST00000448520 H3BUT2 72 aa8.08□□□□□ -1.12
PDLIM2-213ENST00000448520 CRYGAP11844 174 aa8.08□□□□□ -1.12
PDLIM2-213ENST00000448520 ANAPC11Q9NYG5 84 aa8.08□□□□□ -1.12
PDLIM2-213ENST00000448520 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
PDLIM2-213ENST00000448520 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
PDLIM2-213ENST00000448520 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
PDLIM2-213ENST00000448520 SCGB1C2P0DMR2 95 aa8.06□□□□□ -1.12
PDLIM2-213ENST00000448520 SPRR4Q96PI1 79 aa8.06□□□□□ -1.12
PDLIM2-213ENST00000448520 hADV29S1A0JD25 119 aa8.05□□□□□ -1.12
PDLIM2-213ENST00000448520 H0YGX0 51 aa8.05□□□□□ -1.12
PDLIM2-213ENST00000448520 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
PDLIM2-213ENST00000448520 A0A087X002 238 aa8.04□□□□□ -1.12
PDLIM2-213ENST00000448520 COX6CP09669 75 aa8.04□□□□□ -1.12
PDLIM2-213ENST00000448520 DEFB105AQ8NG35 78 aa8.04□□□□□ -1.12
PDLIM2-213ENST00000448520 MUC2Q02817 5179 aa8.03□□□□□ -1.12
PDLIM2-213ENST00000448520 SLC25A20O43772 301 aa8.03□□□□□ -1.12
PDLIM2-213ENST00000448520 Q6ZQY7 126 aa8.03□□□□□ -1.12
PDLIM2-213ENST00000448520 TCL1BO95988 128 aa8.02□□□□□ -1.13
PDLIM2-213ENST00000448520 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
PDLIM2-213ENST00000448520 A0A1W2PPM0 123 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms