RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 UBL5Q9BZL1 73 aa0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 URB1O60287 2271 aaKnown RBP0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 DSTQ03001 7570 aaKnown RBP0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 NEBP20929 6669 aa0.66□□□□□ -2.3
RNU4-78P-201ENST00000410940 H1FX-AS1Q4G0G2 97 aa0.66□□□□□ -2.3
RNU4-78P-201ENST00000410940 ABCA9Q8IUA7 1624 aa0.66□□□□□ -2.3
RNU4-78P-201ENST00000410940 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
RNU4-78P-201ENST00000410940 PARP4Q9UKK3 1724 aaKnown RBP0.65□□□□□ -2.31
RNU4-78P-201ENST00000410940 DEFB131BA0A096LNP1 70 aa0.65□□□□□ -2.31
RNU4-78P-201ENST00000410940 KCNQ1DNQ9H478 68 aa0.65□□□□□ -2.31
RNU4-78P-201ENST00000410940 USP24Q9UPU5 2620 aa0.65□□□□□ -2.31
RNU4-78P-201ENST00000410940 UBR4Q5T4S7 5183 aa0.65□□□□□ -2.31
RNU4-78P-201ENST00000410940 COL6A3P12111 3177 aa0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 PTPRZ1P23471 2315 aaPredicted RBP0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 GNG13Q9P2W3 67 aa0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 ZNF469Q96JG9 3925 aaPredicted RBP0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 FRAS1Q86XX4 4008 aa0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 WIZO95785 1651 aa0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
RNU4-78P-201ENST00000410940 TNCP24821 2201 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 USF3Q68DE3 2245 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 DEFB114Q30KQ6 69 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 TPRP12270 2363 aaKnown RBP0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 DEPDC5O75140 1603 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 CHD9Q3L8U1 2897 aa0.63□□□□□ -2.31
RNU4-78P-201ENST00000410940 APCP25054 2843 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 PRO3102Q9H379 93 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 RNF17Q9BXT8 1623 aaKnown RBP0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 PLCE1Q9P212 2302 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 PTPRQQ9UMZ3 2332 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 PLXNC1O60486 1568 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 DIP2AQ14689 1571 aa0.62□□□□□ -2.31
RNU4-78P-201ENST00000410940 DDX60LQ5H9U9 1706 aaKnown RBP0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 CCDC180Q9P1Z9 1646 aa0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 PIEZO1Q92508 2521 aa0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 HILPDAQ9Y5L2 63 aa0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 ITSN1Q15811 1721 aa0.61□□□□□ -2.31
RNU4-78P-201ENST00000410940 NDUFA3O95167 84 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 ENHOQ6UWT2 76 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 WFDC13Q8IUB5 93 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 S100ZQ8WXG8 99 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 DOPEY2Q9Y3R5 2298 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 TIAM1Q13009 1591 aa0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
RNU4-78P-201ENST00000410940 KLK9Q2XQG4 91 aa0.59□□□□□ -2.31
RNU4-78P-201ENST00000410940 KIAA1109Q2LD37 5005 aa0.59□□□□□ -2.32
RNU4-78P-201ENST00000410940 MADDQ8WXG6 1647 aa0.58□□□□□ -2.32
RNU4-78P-201ENST00000410940 PTPN13Q12923 2485 aa0.58□□□□□ -2.32
RNU4-78P-201ENST00000410940 F8P00451 2351 aa0.57□□□□□ -2.32
RNU4-78P-201ENST00000410940 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
RNU4-78P-201ENST00000410940 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
RNU4-78P-201ENST00000410940 TEP1Q99973 2627 aaKnown RBP0.57□□□□□ -2.32
RNU4-78P-201ENST00000410940 C4AP0C0L4 1744 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 C4BP0C0L5 1744 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 ZNF292O60281 2723 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 ETDCA0A1B0GVM5 59 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 LINC00158P58513 81 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 TENM3Q9P273 2699 aa0.56□□□□□ -2.32
RNU4-78P-201ENST00000410940 NRAPQ86VF7 1730 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 TRANK1O15050 2925 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 LOC730098B7Z3J9 87 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 LYNX1G3V0Z9 82 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 C3P01024 1663 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 MUC2Q02817 5179 aa0.55□□□□□ -2.32
RNU4-78P-201ENST00000410940 LELP1Q5T871 98 aa0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 SMIM5Q71RC9 77 aa0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 PKDREJQ9NTG1 2253 aa0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 ABCC6O95255 1503 aa0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 ABCA10Q8WWZ4 1543 aa0.54□□□□□ -2.32
RNU4-78P-201ENST00000410940 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.32
RNU4-78P-201ENST00000410940 NCOR1O75376 2440 aa0.53□□□□□ -2.33
RNU4-78P-201ENST00000410940 CHD8Q9HCK8 2581 aa0.52□□□□□ -2.33
RNU4-78P-201ENST00000410940 K7EMI3 77 aa0.52□□□□□ -2.33
RNU4-78P-201ENST00000410940 M0R2T5 61 aa0.52□□□□□ -2.33
RNU4-78P-201ENST00000410940 KIAA0586Q9BVV6 1533 aa0.52□□□□□ -2.33
RNU4-78P-201ENST00000410940 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
RNU4-78P-201ENST00000410940 AKAP6Q13023 2319 aa0.51□□□□□ -2.33
RNU4-78P-201ENST00000410940 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
RNU4-78P-201ENST00000410940 ANKHD1Q8IWZ3 2542 aaKnown RBP0.51□□□□□ -2.33
RNU4-78P-201ENST00000410940 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
RNU4-78P-201ENST00000410940 TJP1Q07157 1748 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 LINC01549A6NIU2 74 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 H0YAA0 97 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 SERF2P84101 59 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 KMT2DO14686 5537 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 ANK2Q01484 3957 aa0.5□□□□□ -2.33
RNU4-78P-201ENST00000410940 ABCA6Q8N139 1617 aa0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 CNOT1A5YKK6 2376 aaKnown RBP0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 MAST1Q9Y2H9 1570 aa0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 WNK2Q9Y3S1 2297 aa0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 USP9XQ93008 2570 aaPredicted RBP0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
RNU4-78P-201ENST00000410940 VWFP04275 2813 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms