RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 MUC6Q6W4X9 2439 aa6.4□□□□□ -1.39
SMAD9-203ENST00000399275 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.39
SMAD9-203ENST00000399275 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
SMAD9-203ENST00000399275 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
SMAD9-203ENST00000399275 INAFM1C9JVW0 142 aa6.38□□□□□ -1.39
SMAD9-203ENST00000399275 PRUNE2Q8WUY3 3088 aa6.38□□□□□ -1.39
SMAD9-203ENST00000399275 A0A0D9SG42 100 aa6.37□□□□□ -1.39
SMAD9-203ENST00000399275 PTPN13Q12923 2485 aa6.37□□□□□ -1.39
SMAD9-203ENST00000399275 SPACA4Q8TDM5 124 aa6.37□□□□□ -1.39
SMAD9-203ENST00000399275 MYO18BQ8IUG5 2567 aa6.36□□□□□ -1.39
SMAD9-203ENST00000399275 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
SMAD9-203ENST00000399275 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
SMAD9-203ENST00000399275 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
SMAD9-203ENST00000399275 BDP1A6H8Y1 2624 aa6.35□□□□□ -1.39
SMAD9-203ENST00000399275 SPINK7P58062 85 aa6.35□□□□□ -1.39
SMAD9-203ENST00000399275 M0R2N4 97 aa6.33□□□□□ -1.4
SMAD9-203ENST00000399275 H3BNG1 76 aa6.33□□□□□ -1.4
SMAD9-203ENST00000399275 Q8NAQ8 132 aa6.33□□□□□ -1.4
SMAD9-203ENST00000399275 VCANP13611 3396 aa6.32□□□□□ -1.4
SMAD9-203ENST00000399275 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
SMAD9-203ENST00000399275 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
SMAD9-203ENST00000399275 CACNA1AO00555 2505 aa6.32□□□□□ -1.4
SMAD9-203ENST00000399275 IGFL1Q6UW32 110 aa6.32□□□□□ -1.4
SMAD9-203ENST00000399275 HIVEP2P31629 2446 aa6.31□□□□□ -1.4
SMAD9-203ENST00000399275 IGF2RP11717 2491 aa6.31□□□□□ -1.4
SMAD9-203ENST00000399275 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
SMAD9-203ENST00000399275 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
SMAD9-203ENST00000399275 Q96NJ1 140 aa6.3□□□□□ -1.4
SMAD9-203ENST00000399275 A0A1B0GU33 70 aa6.3□□□□□ -1.4
SMAD9-203ENST00000399275 MYO9AB2RTY4 2548 aa6.29□□□□□ -1.4
SMAD9-203ENST00000399275 PRRC2CQ9Y520 2896 aaKnown RBP6.28□□□□□ -1.4
SMAD9-203ENST00000399275 TRIOO75962 3097 aa6.28□□□□□ -1.4
SMAD9-203ENST00000399275 LAMA1P25391 3075 aa6.28□□□□□ -1.4
SMAD9-203ENST00000399275 KRTAP10-9P60411 292 aa6.28□□□□□ -1.4
SMAD9-203ENST00000399275 Q8N377 158 aa6.28□□□□□ -1.4
SMAD9-203ENST00000399275 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
SMAD9-203ENST00000399275 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
SMAD9-203ENST00000399275 ABCA2Q9BZC7 2435 aa6.26□□□□□ -1.41
SMAD9-203ENST00000399275 RTL8CO15255 209 aa6.26□□□□□ -1.41
SMAD9-203ENST00000399275 TLN1Q9Y490 2541 aaKnown RBP6.25□□□□□ -1.41
SMAD9-203ENST00000399275 REV3LO60673 3130 aa6.25□□□□□ -1.41
SMAD9-203ENST00000399275 USP34Q70CQ2 3546 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 DSCR10P59022 87 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 PRR34Q9NV39 138 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 LINC00612Q8N6U2 182 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 SPEGQ15772 3267 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 HIVEP3Q5T1R4 2406 aa6.24□□□□□ -1.41
SMAD9-203ENST00000399275 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
SMAD9-203ENST00000399275 EYSQ5T1H1 3165 aa6.23□□□□□ -1.41
SMAD9-203ENST00000399275 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
SMAD9-203ENST00000399275 A6NN06 94 aa6.22□□□□□ -1.41
SMAD9-203ENST00000399275 ACACBO00763 2458 aa6.22□□□□□ -1.41
SMAD9-203ENST00000399275 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.41
SMAD9-203ENST00000399275 CEP295Q9C0D2 2601 aa6.21□□□□□ -1.42
SMAD9-203ENST00000399275 NDUFAF8A1L188 74 aa6.21□□□□□ -1.42
SMAD9-203ENST00000399275 Q8N1X5 172 aa6.2□□□□□ -1.42
SMAD9-203ENST00000399275 CFAP54Q96N23 3096 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 CCDC168Q8NDH2 2452 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 DNAH10OSP0CZ25 163 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 HRES1P13985 223 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 CELSR3Q9NYQ7 3312 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 NCOR2Q9Y618 2525 aa6.19□□□□□ -1.42
SMAD9-203ENST00000399275 A0A096LNT2 108 aa6.18□□□□□ -1.42
SMAD9-203ENST00000399275 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
SMAD9-203ENST00000399275 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
SMAD9-203ENST00000399275 NAV2Q8IVL1 2488 aa6.17□□□□□ -1.42
SMAD9-203ENST00000399275 FN1P02751 2386 aaKnown RBP6.17□□□□□ -1.42
SMAD9-203ENST00000399275 C19orf73Q9NVV2 129 aa6.17□□□□□ -1.42
SMAD9-203ENST00000399275 ROMO1P60602 79 aa6.17□□□□□ -1.42
SMAD9-203ENST00000399275 TLN2Q9Y4G6 2542 aa6.16□□□□□ -1.42
SMAD9-203ENST00000399275 SMR3AQ99954 134 aa6.16□□□□□ -1.42
SMAD9-203ENST00000399275 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
SMAD9-203ENST00000399275 FAM168BA1KXE4 195 aa6.13□□□□□ -1.43
SMAD9-203ENST00000399275 NOTCH2Q04721 2471 aa6.12□□□□□ -1.43
SMAD9-203ENST00000399275 LY6G6CO95867 125 aa6.12□□□□□ -1.43
SMAD9-203ENST00000399275 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
SMAD9-203ENST00000399275 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
SMAD9-203ENST00000399275 LRRK2Q5S007 2527 aa6.11□□□□□ -1.43
SMAD9-203ENST00000399275 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
SMAD9-203ENST00000399275 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
SMAD9-203ENST00000399275 FREM2Q5SZK8 3169 aa6.09□□□□□ -1.43
SMAD9-203ENST00000399275 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
SMAD9-203ENST00000399275 WDFY4Q6ZS81 3184 aa6.08□□□□□ -1.44
SMAD9-203ENST00000399275 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
SMAD9-203ENST00000399275 ACANP16112 2415 aa6.07□□□□□ -1.44
SMAD9-203ENST00000399275 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
SMAD9-203ENST00000399275 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
SMAD9-203ENST00000399275 COL6A3P12111 3177 aa6.05□□□□□ -1.44
SMAD9-203ENST00000399275 FRYLO94915 3013 aa6.04□□□□□ -1.44
SMAD9-203ENST00000399275 CHD8Q9HCK8 2581 aa6.04□□□□□ -1.44
SMAD9-203ENST00000399275 POLQO75417 2590 aa6.04□□□□□ -1.44
SMAD9-203ENST00000399275 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
SMAD9-203ENST00000399275 MGAQ8IWI9 3026 aa6.03□□□□□ -1.44
SMAD9-203ENST00000399275 Q8NDZ9 215 aa6.02□□□□□ -1.45
SMAD9-203ENST00000399275 PKD1L2Q7Z442 2459 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms