RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 H0Y9J4 135 aa7.89□□□□□ -1.15
CLCN6-205ENST00000376492 HINT1P49773 126 aaPredicted RBP7.89□□□□□ -1.15
CLCN6-205ENST00000376492 COL5A1-AS1Q5SY13 56 aa7.89□□□□□ -1.15
CLCN6-205ENST00000376492 SND1-IT1Q9HBX3 110 aa7.89□□□□□ -1.15
CLCN6-205ENST00000376492 C22orf24Q9Y442 160 aa7.89□□□□□ -1.15
CLCN6-205ENST00000376492 TRBV10-2A0A0K0K1G8 114 aa7.88□□□□□ -1.15
CLCN6-205ENST00000376492 A4D1N5 150 aa7.88□□□□□ -1.15
CLCN6-205ENST00000376492 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
CLCN6-205ENST00000376492 FXYD2P54710 66 aa7.88□□□□□ -1.15
CLCN6-205ENST00000376492 TRAV13-2A0A0B4J235 113 aa7.87□□□□□ -1.15
CLCN6-205ENST00000376492 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
CLCN6-205ENST00000376492 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
CLCN6-205ENST00000376492 CBY1Q9Y3M2 126 aa7.87□□□□□ -1.15
CLCN6-205ENST00000376492 IGLV1-50A0A075B6I6 118 aa7.86□□□□□ -1.15
CLCN6-205ENST00000376492 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
CLCN6-205ENST00000376492 UBE2BP63146 152 aa7.86□□□□□ -1.15
CLCN6-205ENST00000376492 DAND5Q8N907 189 aa7.86□□□□□ -1.15
CLCN6-205ENST00000376492 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
CLCN6-205ENST00000376492 A0A0U1RRA0 63 aa7.85□□□□□ -1.15
CLCN6-205ENST00000376492 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
CLCN6-205ENST00000376492 CFC1P0CG37 223 aa7.85□□□□□ -1.15
CLCN6-205ENST00000376492 LCE2AQ5TA79 106 aaPredicted RBP7.85□□□□□ -1.15
CLCN6-205ENST00000376492 MRPL55Q7Z7F7 128 aaKnown RBP7.85□□□□□ -1.15
CLCN6-205ENST00000376492 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
CLCN6-205ENST00000376492 RAB37Q96AX2 223 aa7.84□□□□□ -1.15
CLCN6-205ENST00000376492 NHP2Q9NX24 153 aaKnown RBP7.84□□□□□ -1.15
CLCN6-205ENST00000376492 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
CLCN6-205ENST00000376492 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
CLCN6-205ENST00000376492 LINC00167Q96N53 147 aa7.82□□□□□ -1.16
CLCN6-205ENST00000376492 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
CLCN6-205ENST00000376492 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
CLCN6-205ENST00000376492 BATFQ16520 125 aa7.81□□□□□ -1.16
CLCN6-205ENST00000376492 M0R378 163 aa7.8□□□□□ -1.16
CLCN6-205ENST00000376492 VPREB1P12018 145 aa7.8□□□□□ -1.16
CLCN6-205ENST00000376492 NPC2P61916 151 aa7.8□□□□□ -1.16
CLCN6-205ENST00000376492 NKAPP1Q8N9T2 125 aa7.8□□□□□ -1.16
CLCN6-205ENST00000376492 RPL13AP40429 203 aaKnown RBP7.79□□□□□ -1.16
CLCN6-205ENST00000376492 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 ZNF861PO60384 105 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 TSPAN13O95857 204 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 LYRM7Q5U5X0 104 aa7.78□□□□□ -1.16
CLCN6-205ENST00000376492 BCE1O60756 84 aa7.77□□□□□ -1.17
CLCN6-205ENST00000376492 RPL28P46779 137 aaKnown RBP7.77□□□□□ -1.17
CLCN6-205ENST00000376492 LINC00337Q8N6G1 96 aa7.77□□□□□ -1.17
CLCN6-205ENST00000376492 Q8NDZ9 215 aa7.77□□□□□ -1.17
CLCN6-205ENST00000376492 COX6CP09669 75 aa7.76□□□□□ -1.17
CLCN6-205ENST00000376492 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
CLCN6-205ENST00000376492 S100A7L2Q5SY68 101 aa7.75□□□□□ -1.17
CLCN6-205ENST00000376492 K7ERJ3 54 aa7.74□□□□□ -1.17
CLCN6-205ENST00000376492 KCNQ1DNQ9H478 68 aa7.74□□□□□ -1.17
CLCN6-205ENST00000376492 TRBV20-1A0A075B6N2 111 aa7.73□□□□□ -1.17
CLCN6-205ENST00000376492 H0YGX0 51 aa7.73□□□□□ -1.17
CLCN6-205ENST00000376492 FABP2P12104 132 aa7.72□□□□□ -1.17
CLCN6-205ENST00000376492 KRTAP13-1Q8IUC0 172 aa7.72□□□□□ -1.17
CLCN6-205ENST00000376492 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CLCN6-205ENST00000376492 A0A087X002 238 aa7.71□□□□□ -1.18
CLCN6-205ENST00000376492 A0A1B0GX51 115 aa7.71□□□□□ -1.18
CLCN6-205ENST00000376492 A0A1W2PPM0 123 aa7.71□□□□□ -1.18
CLCN6-205ENST00000376492 VAMP3Q15836 100 aa7.71□□□□□ -1.18
CLCN6-205ENST00000376492 Q1RN00 199 aa7.71□□□□□ -1.18
CLCN6-205ENST00000376492 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
CLCN6-205ENST00000376492 H3BUT2 72 aa7.7□□□□□ -1.18
CLCN6-205ENST00000376492 PRYO14603 147 aa7.7□□□□□ -1.18
CLCN6-205ENST00000376492 NCR3O14931 201 aa7.7□□□□□ -1.18
CLCN6-205ENST00000376492 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
CLCN6-205ENST00000376492 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
CLCN6-205ENST00000376492 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
CLCN6-205ENST00000376492 SPRR1AP35321 89 aa7.69□□□□□ -1.18
CLCN6-205ENST00000376492 UBE2AP49459 152 aa7.69□□□□□ -1.18
CLCN6-205ENST00000376492 SNCGO76070 127 aa7.68□□□□□ -1.18
CLCN6-205ENST00000376492 PSMB2P49721 201 aa7.68□□□□□ -1.18
CLCN6-205ENST00000376492 RETNLBQ9BQ08 111 aa7.68□□□□□ -1.18
CLCN6-205ENST00000376492 TRIAP1O43715 76 aa7.67□□□□□ -1.18
CLCN6-205ENST00000376492 ZNF73O43830 326 aaPredicted RBP7.67□□□□□ -1.18
CLCN6-205ENST00000376492 GTF2H5Q6ZYL4 71 aa7.67□□□□□ -1.18
CLCN6-205ENST00000376492 SCGB1C2P0DMR2 95 aa7.66□□□□□ -1.18
CLCN6-205ENST00000376492 FAM19A1Q7Z5A9 133 aa7.66□□□□□ -1.18
CLCN6-205ENST00000376492 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
CLCN6-205ENST00000376492 H7C2G1 150 aa7.65□□□□□ -1.18
CLCN6-205ENST00000376492 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
CLCN6-205ENST00000376492 H3BQ85 93 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 GHRHP01286 108 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 TRACP01848 142 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
CLCN6-205ENST00000376492 PRLHP81277 87 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 ATXN8Q156A1 80 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 C6orf99Q4VX62 202 aa7.64□□□□□ -1.19
CLCN6-205ENST00000376492 KRTAP4-16G5E9R7 235 aaPredicted RBP7.63□□□□□ -1.19
CLCN6-205ENST00000376492 K7EP34 96 aa7.63□□□□□ -1.19
CLCN6-205ENST00000376492 LST1O00453 97 aa7.63□□□□□ -1.19
CLCN6-205ENST00000376492 CRYGAP11844 174 aa7.63□□□□□ -1.19
CLCN6-205ENST00000376492 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
CLCN6-205ENST00000376492 CDIP1Q9H305 208 aa7.62□□□□□ -1.19
CLCN6-205ENST00000376492 COX7BP24311 80 aa7.61□□□□□ -1.19
CLCN6-205ENST00000376492 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
CLCN6-205ENST00000376492 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms