RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
COL11A1-201ENST00000353414 SETD2Q9BYW2 2564 aaPredicted RBP6.66□□□□□ -1.34
COL11A1-201ENST00000353414 BPTFQ12830 3046 aa6.65□□□□□ -1.34
COL11A1-201ENST00000353414 H3BNG1 76 aa6.65□□□□□ -1.35
COL11A1-201ENST00000353414 ZNF462Q96JM2 2506 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 UQCR11O14957 56 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 SPTBN4Q9H254 2564 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 A8MWP4 228 aa6.64□□□□□ -1.35
COL11A1-201ENST00000353414 GVQW2A0A096LPI5 108 aaPredicted RBP6.63□□□□□ -1.35
COL11A1-201ENST00000353414 UNC80Q8N2C7 3258 aa6.62□□□□□ -1.35
COL11A1-201ENST00000353414 KRTAP10-3P60369 221 aa6.61□□□□□ -1.35
COL11A1-201ENST00000353414 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
COL11A1-201ENST00000353414 IGLV5-48A0A075B6I7 105 aa6.61□□□□□ -1.35
COL11A1-201ENST00000353414 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
COL11A1-201ENST00000353414 COX8CQ7Z4L0 72 aa6.6□□□□□ -1.35
COL11A1-201ENST00000353414 CFAP54Q96N23 3096 aa6.59□□□□□ -1.35
COL11A1-201ENST00000353414 CASC10Q5T4H9 136 aa6.59□□□□□ -1.35
COL11A1-201ENST00000353414 LINC00528Q8N1L1 170 aa6.59□□□□□ -1.35
COL11A1-201ENST00000353414 A0A087WTM6 91 aa6.59□□□□□ -1.35
COL11A1-201ENST00000353414 PRRC2CQ9Y520 2896 aaKnown RBP6.58□□□□□ -1.36
COL11A1-201ENST00000353414 A0A0C4DFX4 3053 aa6.58□□□□□ -1.36
COL11A1-201ENST00000353414 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
COL11A1-201ENST00000353414 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
COL11A1-201ENST00000353414 H3BPC8 53 aa6.57□□□□□ -1.36
COL11A1-201ENST00000353414 ZNF861PO60384 105 aa6.57□□□□□ -1.36
COL11A1-201ENST00000353414 LOC101927531A0A1B0GV80 90 aa6.57□□□□□ -1.36
COL11A1-201ENST00000353414 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
COL11A1-201ENST00000353414 LOC110117498A0A087WWA1 95 aa6.56□□□□□ -1.36
COL11A1-201ENST00000353414 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
COL11A1-201ENST00000353414 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
COL11A1-201ENST00000353414 CR1P17927 2039 aa6.56□□□□□ -1.36
COL11A1-201ENST00000353414 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
COL11A1-201ENST00000353414 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
COL11A1-201ENST00000353414 LINC00336Q6ZUF6 198 aa6.54□□□□□ -1.36
COL11A1-201ENST00000353414 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
COL11A1-201ENST00000353414 PRR15Q8IV56 129 aa6.54□□□□□ -1.36
COL11A1-201ENST00000353414 PRO0461Q9UI25 63 aa6.53□□□□□ -1.36
COL11A1-201ENST00000353414 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
COL11A1-201ENST00000353414 Q6ZSA8 131 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 PKD1L2Q7Z442 2459 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 ANKRD11Q6UB99 2663 aaPredicted RBP6.52□□□□□ -1.37
COL11A1-201ENST00000353414 ERC2-IT1O76042 136 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 CYP4F30PQ9H0H9 118 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 LCA10Q71F78 164 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 CD164Q04900 197 aa6.52□□□□□ -1.37
COL11A1-201ENST00000353414 LINC01546A6NGU7 62 aa6.51□□□□□ -1.37
COL11A1-201ENST00000353414 POLQO75417 2590 aa6.51□□□□□ -1.37
COL11A1-201ENST00000353414 Q8N377 158 aa6.5□□□□□ -1.37
COL11A1-201ENST00000353414 USP9XQ93008 2570 aaPredicted RBP6.5□□□□□ -1.37
COL11A1-201ENST00000353414 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
COL11A1-201ENST00000353414 CHD8Q9HCK8 2581 aa6.49□□□□□ -1.37
COL11A1-201ENST00000353414 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
COL11A1-201ENST00000353414 TNP2Q05952 138 aa6.48□□□□□ -1.37
COL11A1-201ENST00000353414 PRR26Q8N8Z3 221 aa6.47□□□□□ -1.37
COL11A1-201ENST00000353414 TRIOO75962 3097 aa6.47□□□□□ -1.37
COL11A1-201ENST00000353414 CHD7Q9P2D1 2997 aa6.47□□□□□ -1.37
COL11A1-201ENST00000353414 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
COL11A1-201ENST00000353414 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
COL11A1-201ENST00000353414 H3BS24 57 aa6.44□□□□□ -1.38
COL11A1-201ENST00000353414 HTTP42858 3142 aa6.44□□□□□ -1.38
COL11A1-201ENST00000353414 C19orf73Q9NVV2 129 aa6.44□□□□□ -1.38
COL11A1-201ENST00000353414 LITAFQ99732 161 aa6.43□□□□□ -1.38
COL11A1-201ENST00000353414 LINC00612Q8N6U2 182 aa6.43□□□□□ -1.38
COL11A1-201ENST00000353414 VPS13AQ96RL7 3174 aa6.43□□□□□ -1.38
COL11A1-201ENST00000353414 USP24Q9UPU5 2620 aa6.43□□□□□ -1.38
COL11A1-201ENST00000353414 A0A1B0GW54 56 aa6.42□□□□□ -1.38
COL11A1-201ENST00000353414 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
COL11A1-201ENST00000353414 MTORP42345 2549 aa6.42□□□□□ -1.38
COL11A1-201ENST00000353414 VCANP13611 3396 aa6.42□□□□□ -1.38
COL11A1-201ENST00000353414 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
COL11A1-201ENST00000353414 EYSQ5T1H1 3165 aa6.41□□□□□ -1.38
COL11A1-201ENST00000353414 FASNP49327 2511 aaKnown RBP6.4□□□□□ -1.38
COL11A1-201ENST00000353414 SPRR4Q96PI1 79 aa6.4□□□□□ -1.38
COL11A1-201ENST00000353414 FREM2Q5SZK8 3169 aa6.4□□□□□ -1.39
COL11A1-201ENST00000353414 USP34Q70CQ2 3546 aa6.39□□□□□ -1.39
COL11A1-201ENST00000353414 C9orf163Q8N9P6 203 aa6.39□□□□□ -1.39
COL11A1-201ENST00000353414 GIG44P09565 113 aaPredicted RBP6.38□□□□□ -1.39
COL11A1-201ENST00000353414 REV3LO60673 3130 aa6.38□□□□□ -1.39
COL11A1-201ENST00000353414 SPEGQ15772 3267 aa6.38□□□□□ -1.39
COL11A1-201ENST00000353414 H7BZZ5 65 aa6.37□□□□□ -1.39
COL11A1-201ENST00000353414 TLX1NBP0CAT3 122 aa6.37□□□□□ -1.39
COL11A1-201ENST00000353414 WDFY4Q6ZS81 3184 aa6.36□□□□□ -1.39
COL11A1-201ENST00000353414 COL6A3P12111 3177 aa6.36□□□□□ -1.39
COL11A1-201ENST00000353414 Q1T7F1 81 aa6.36□□□□□ -1.39
COL11A1-201ENST00000353414 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
COL11A1-201ENST00000353414 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
COL11A1-201ENST00000353414 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
COL11A1-201ENST00000353414 CEP295Q9C0D2 2601 aa6.34□□□□□ -1.39
COL11A1-201ENST00000353414 MYO15AQ9UKN7 3530 aa6.34□□□□□ -1.4
COL11A1-201ENST00000353414 PRR34Q9NV39 138 aa6.34□□□□□ -1.4
COL11A1-201ENST00000353414 LAMA1P25391 3075 aa6.33□□□□□ -1.4
COL11A1-201ENST00000353414 KLK9Q2XQG4 91 aa6.33□□□□□ -1.4
COL11A1-201ENST00000353414 S4R3F8 94 aa6.32□□□□□ -1.4
COL11A1-201ENST00000353414 Q5VSD8 79 aa6.31□□□□□ -1.4
COL11A1-201ENST00000353414 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
COL11A1-201ENST00000353414 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
COL11A1-201ENST00000353414 KRTAP1-3Q8IUG1 177 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms