RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 K7ERJ3 54 aa5.68□□□□□ -1.5
HMHB1-201ENST00000289448 MRPL55Q7Z7F7 128 aaKnown RBP5.68□□□□□ -1.5
HMHB1-201ENST00000289448 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
HMHB1-201ENST00000289448 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
HMHB1-201ENST00000289448 RPL37AP8A6NKH3 93 aa5.67□□□□□ -1.5
HMHB1-201ENST00000289448 RAB37Q96AX2 223 aa5.67□□□□□ -1.5
HMHB1-201ENST00000289448 MUC2Q02817 5179 aa5.67□□□□□ -1.5
HMHB1-201ENST00000289448 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 H3BUT2 72 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 BCE1O60756 84 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 CFC1BP0CG36 223 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 CFC1P0CG37 223 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 VAMP3Q15836 100 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 ERG28Q9UKR5 140 aa5.66□□□□□ -1.5
HMHB1-201ENST00000289448 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 A0A087X002 238 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 FABP2P12104 132 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 LINC00158P58513 81 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 COX17Q14061 63 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 DAND5Q8N907 189 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 PRO1854Q9UHT4 67 aa5.65□□□□□ -1.5
HMHB1-201ENST00000289448 A0A1W2PPM0 123 aa5.64□□□□□ -1.51
HMHB1-201ENST00000289448 RPL13AP40429 203 aaKnown RBP5.64□□□□□ -1.51
HMHB1-201ENST00000289448 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
HMHB1-201ENST00000289448 SOSTDC1Q6X4U4 206 aa5.64□□□□□ -1.51
HMHB1-201ENST00000289448 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
HMHB1-201ENST00000289448 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
HMHB1-201ENST00000289448 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
HMHB1-201ENST00000289448 PFN2P35080 140 aa5.63□□□□□ -1.51
HMHB1-201ENST00000289448 NPC2P61916 151 aa5.63□□□□□ -1.51
HMHB1-201ENST00000289448 Q8NDZ9 215 aa5.63□□□□□ -1.51
HMHB1-201ENST00000289448 NAA38Q9BRA0 125 aaKnown RBP5.63□□□□□ -1.51
HMHB1-201ENST00000289448 TSPAN13O95857 204 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 VPREB1P12018 145 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 LYRM7Q5U5X0 104 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 GTF2H5Q6ZYL4 71 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 SND1-IT1Q9HBX3 110 aa5.62□□□□□ -1.51
HMHB1-201ENST00000289448 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 K7EP34 96 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 PRR4Q16378 134 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 SPCS1Q9Y6A9 102 aa5.61□□□□□ -1.51
HMHB1-201ENST00000289448 CRYGAP11844 174 aa5.6□□□□□ -1.51
HMHB1-201ENST00000289448 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
HMHB1-201ENST00000289448 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
HMHB1-201ENST00000289448 UBE2AP49459 152 aa5.59□□□□□ -1.51
HMHB1-201ENST00000289448 Q1RN00 199 aa5.59□□□□□ -1.51
HMHB1-201ENST00000289448 H7C2G1 150 aa5.58□□□□□ -1.52
HMHB1-201ENST00000289448 NDUFC2O95298 119 aa5.58□□□□□ -1.52
HMHB1-201ENST00000289448 PSMB2P49721 201 aa5.58□□□□□ -1.52
HMHB1-201ENST00000289448 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
HMHB1-201ENST00000289448 TMEM126AQ9H061 195 aa5.58□□□□□ -1.52
HMHB1-201ENST00000289448 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
HMHB1-201ENST00000289448 M0R378 163 aa5.57□□□□□ -1.52
HMHB1-201ENST00000289448 SCGB1C2P0DMR2 95 aa5.57□□□□□ -1.52
HMHB1-201ENST00000289448 PRLHP81277 87 aa5.57□□□□□ -1.52
HMHB1-201ENST00000289448 COX6CP09669 75 aa5.56□□□□□ -1.52
HMHB1-201ENST00000289448 FAM19A1Q7Z5A9 133 aa5.56□□□□□ -1.52
HMHB1-201ENST00000289448 TRIAP1O43715 76 aa5.55□□□□□ -1.52
HMHB1-201ENST00000289448 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
HMHB1-201ENST00000289448 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
HMHB1-201ENST00000289448 TRBV10-2A0A0K0K1G8 114 aa5.53□□□□□ -1.52
HMHB1-201ENST00000289448 TCL1BO95988 128 aa5.53□□□□□ -1.52
HMHB1-201ENST00000289448 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
HMHB1-201ENST00000289448 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
HMHB1-201ENST00000289448 H3BMG7 143 aa5.52□□□□□ -1.53
HMHB1-201ENST00000289448 ATXN8Q156A1 80 aa5.52□□□□□ -1.53
HMHB1-201ENST00000289448 C3orf22Q8N5N4 141 aa5.52□□□□□ -1.53
HMHB1-201ENST00000289448 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
HMHB1-201ENST00000289448 OR13C6PQ8NH95 151 aa5.52□□□□□ -1.53
HMHB1-201ENST00000289448 F8W1H4 67 aa5.51□□□□□ -1.53
HMHB1-201ENST00000289448 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
HMHB1-201ENST00000289448 HIGD2AQ9BW72 106 aa5.51□□□□□ -1.53
HMHB1-201ENST00000289448 NCR3O14931 201 aa5.5□□□□□ -1.53
HMHB1-201ENST00000289448 PRO0461Q9UI25 63 aa5.5□□□□□ -1.53
HMHB1-201ENST00000289448 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 H0YGX0 51 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 LST1O00453 97 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 CBY1Q9Y3M2 126 aa5.49□□□□□ -1.53
HMHB1-201ENST00000289448 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
HMHB1-201ENST00000289448 IGLV6-57P01721 117 aa5.48□□□□□ -1.53
HMHB1-201ENST00000289448 SPRR1AP35321 89 aa5.48□□□□□ -1.53
HMHB1-201ENST00000289448 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
HMHB1-201ENST00000289448 C9JAW5 83 aa5.47□□□□□ -1.53
HMHB1-201ENST00000289448 PRYO14603 147 aa5.47□□□□□ -1.53
HMHB1-201ENST00000289448 TRACP01848 142 aa5.47□□□□□ -1.53
HMHB1-201ENST00000289448 TRBV10-3A0A0K0K1G6 114 aa5.46□□□□□ -1.54
HMHB1-201ENST00000289448 SLC25A20O43772 301 aa5.46□□□□□ -1.54
HMHB1-201ENST00000289448 SMCR5Q8TEV8 140 aa5.46□□□□□ -1.54
HMHB1-201ENST00000289448 IGLV7-46A0A075B6I9 117 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms