RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ighv7-3A0A075B5R2 120 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ighv14-2A0A075B5R7 117 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Smim6Q3U0I6 56 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr1535Q7TQU0 326 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Rbfox2Q8BP71 449 aaKnown RBP10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Chac2Q9CQG1 178 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ssbp1Q9CYR0 152 aaKnown RBP10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Trav9-1A0A075B601 112 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Cldn1O88551 211 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Higd1cQ76I25 96 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 9230109A22RikQ8BHE6 111 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Gm5468Q8C3D3 155 aa10.61□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ighv3-4A0A0A6YXF1 117 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Gm21913J3KML9 361 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Gm21776J3QPJ5 361 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 LfngO09010 378 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ifna14Q810G3 189 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Vmn1r202Q8R259 302 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ovol1Q9WTJ2 267 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Ighv1-39A0A075B5V5 117 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Lynx1P0DP60 116 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 5730522E02RikQ5SP45 163 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Isg15Q64339 161 aaKnown RBP10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Fam24aQ8CF27 98 aa10.6□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Zfp109A0A0U1RPC5 652 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr218E9PWV2 313 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr869E9PX82 323 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Gm3072F6SKY8 209 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Edn3P48299 214 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr1242Q8VGM6 306 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Errfi1Q99JZ7 461 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Vps25Q9CQ80 176 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Psmg3Q9CZH3 122 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Zfp950A0A0U1RQ46 609 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Nat8f4G5E8L3 226 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Pex7P97865 318 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr823Q7TRH2 315 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Rnf24Q8BGI1 148 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr824Q8VFU4 315 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Olfr954Q9EQB6 314 aa10.59□□□□□ -0.71
Rnf4-204ENSMUST00000182047 Usp9xP70398 2559 aaKnown RBP10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Cnih1O35372 144 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Q24JP4 165 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Pilrb2Q2YFS1 225 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Tmem140Q8BGY5 185 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm11733Q8BQP1 125 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Vmn1r62Q8R2C0 300 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Vma21-psA0A140T8R2 101 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm28305F6U473 122 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Olfr958Q8VEY3 312 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Q9D7E4 109 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Klf13Q9JJZ6 289 aa10.58□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Vmn1r1E9PVR6 306 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Rnf5O35445 180 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Cd52Q64389 74 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Srsf1Q6PDM2 248 aaKnown RBP10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 CompQ9R0G6 755 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Trbv31A0A075B5J5 111 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Trav14n-3A0A075B645 120 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Trav3n-3A0A0G2JEM0 114 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Pf4Q9Z126 105 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Prpf8Q99PV0 2335 aaKnown RBP10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Celsr2Q9R0M0 2920 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Defa22Q8C1N8 93 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Nit1Q8VDK1 323 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Olfr1402Q8VET1 320 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Tmprss5Q9ER04 455 aa10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Dazap1Q9JII5 406 aaKnown RBP10.57□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Igkv14-130A0A0G2JF45 117 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Olfr748E9Q9Z0 307 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm26965M0QWH4 86 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Mc5rP41149 325 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Scnm1Q8K136 229 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Mrpl32Q9DCI9 187 aaKnown RBP10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 GlrxQ9QUH0 107 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Trav12-3A0A075B648 115 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 P01736 120 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Hoxb4P10284 250 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Tac3P55099 116 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Plscr4P58196 326 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Clec4b2Q67DU8 208 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Prickle3Q80VL3 624 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Insig2Q91WG1 225 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Fam213bQ9DB60 201 aa10.56□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Myo9aQ8C170 2542 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Olfr364-ps1A0A140T8Q2 307 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Zfp114B2RRA8 586 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm6970F7DCP6 221 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 NdpP48744 131 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm9733Q1AN91 178 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Spem1Q5F289 310 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Col7a1Q63870 2944 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Ighv1-55A0A075B5W6 117 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Defb18Q30KP5 85 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Vmn1r195Q5SVD6 316 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Zmat4Q8BZ94 229 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Gm4763Q8CFJ5 196 aa10.55□□□□□ -0.72
Rnf4-204ENSMUST00000182047 TroQ6DIC6 2087 aa10.54□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Ighv5-6A0A075B5Q0 117 aa10.54□□□□□ -0.72
Rnf4-204ENSMUST00000182047 Ighv7-4A0A0A6YXL5 121 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms