RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 P01727 129 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ndufc2Q9CQ54 120 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Spsb3Q571F5 354 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Zfp420Q7TMN8 578 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gm10306Q9CUK2 115 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 C4bP01029 1738 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Trav14d-3-dv8A0A075B619 120 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ccl3P10855 92 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Wbp1P97764 304 aa14.38□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ubl5Q9EPV8 73 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Abca7Q91V24 2159 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv4-68A0A0B4J1I7 117 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 AgerQ62151 402 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 BC049762Q8C601 163 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv4-81A0A0G2JEY5 119 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv6-32A0A140T8N9 115 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Fndc7A2AED3 737 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Tpsab1Q02844 273 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gm7489Q3UT34 171 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 PappaQ8R4K8 1624 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 F8Q06194 2319 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Fgf4P11403 202 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 3110018I06RikQ9CXS0 120 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Dock10Q8BZN6 2150 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 AdmP97297 184 aa14.37□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv6-23A0A140T8N5 115 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Efna4O08542 206 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ltbp1Q8CG19 1712 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Slc25a47Q6IS41 310 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Brd3osA0A1B0GRB6 84 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ccl6P27784 116 aa14.36□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv8-24A0A140T8P5 121 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Shisal2aA2A9G7 189 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 NrtnP97463 195 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Trbv12-1A0A0B4J1H0 124 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 P01741 114 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 PcolceQ61398 468 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Znf740Q6NZQ6 180 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gm20219A0A1B0GRQ3 87 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Timm21Q8CCM6 249 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Rnf166Q3U9F6 237 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ifi27l2aQ8R412 90 aa14.35□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gm10447Q3UQ92 135 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Fam216aQ9DB54 251 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Cbln3Q9JHG0 197 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Fer1l6E0CZ42 1862 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 1700001C19RikQ8K168 210 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gatd1Q8BFQ8 220 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Card19Q9D1I2 183 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ighv3-8A0A075B5T0 131 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ube2e2Q91W82 201 aa14.34□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Igkv14-111A0A140T8P9 117 aa14.33□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Gm19345G3UYD9 124 aa14.33□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Ly86O88188 162 aa14.33□□□□□ -0.11
Pcf11-201ENSMUST00000119954 ElnP54320 860 aa14.33□□□□□ -0.11
Pcf11-201ENSMUST00000119954 PmvkQ9D1G2 192 aa14.33□□□□□ -0.11
Pcf11-201ENSMUST00000119954 Col4a1P02463 1669 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Hoxd3P09027 433 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ca5aP23589 299 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Cdkn2aQ64364 169 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ube2d2bQ6ZWY6 147 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm9747Q810H1 104 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 FocadA2AKG8 1798 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 NrapQ80XB4 1728 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 F930015N05RikQ8C3A3 210 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Rnf114Q9ET26 229 aa14.33□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ighv1-26A0A075B5V0 117 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Q8R092 253 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Nr2c2apQ3TV70 140 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Smim26Q3V460 107 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ccl12Q62401 104 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 MplkipQ9D011 178 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Mrpl52Q9D0Y8 121 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ighv1-76A0A0G2JFE9 117 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Trav6-4A0A075B6B4 115 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Igkv4-59A0A0B4J1I8 117 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Frmpd3A0A140LIW3 1774 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ly6g6dQ9Z1Q3 135 aa14.32□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm27027S4R1M6 97 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm2564F6Z9S8 108 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ccl19O70460 108 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Tmem258P61166 79 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Usmg5Q78IK2 58 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ms4a8Q99N10 290 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ighv14-1A0A075B5R4 117 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ighv5-12-4A0A0A6YWG4 117 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Wfdc9Q3UW41 83 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Ca1P13634 261 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Pfn1P62962 140 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 BB014433Q8C5R5 389 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Psme4Q5SSW2 1843 aa14.31□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Marf1Q8BJ34 1730 aaKnown RBP14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Dock6Q8VDR9 2080 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 9130213A22RikQ3V3T2 120 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Tm2d3Q8BJ83 261 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Zfp36l2P23949 484 aaKnown RBP14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Pgpep1lQ9CWB5 130 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Igkv3-1A0A075B5P1 119 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 Gm44973A0A140LJJ1 189 aa14.3□□□□□ -0.12
Pcf11-201ENSMUST00000119954 B1ARW8 110 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms