RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Npc2Q9Z0J0 149 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 PdfS4R2K0 231 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm5741B2RVA4 72 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21616B6ZB74 166 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Scgb1b2O35176 93 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 BlcapP62951 87 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Bsph1Q3UW26 133 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm20816Q5FWD4 227 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav15-1-dv6-1Q5R1D2 117 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ifi27Q8C6G0 260 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 PgpQ8CHP8 321 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tlcd2Q8VC26 310 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ap5s1Q9D742 170 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr954Q9EQB6 314 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav15-2-dv6-2A0A075B650 123 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav12-1A0N8R1 115 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm15217A2CG07 155 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Prr19B2RW88 366 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem262D3Z338 116 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm10912Q3UXH0 145 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Q5BN45 167 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trdv4Q5R1A3 115 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Mrpl27Q99N92 148 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 PyyQ9EPS2 98 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fbln5Q9WVH9 448 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr1024A2ASU7 327 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem238A9JSM3 176 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem200bD3Z0P8 284 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Iqcf6G3UWF2 157 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm20830J3KML6 227 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Zc2hc1aQ8BJH1 324 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Slc37a1Q8R070 531 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 PpbpQ9EQI5 113 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Sh2d2aQ9QXK9 374 aa5.55□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr364-ps1A0A140T8Q2 307 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Plcxd2B2RXA1 340 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr218E9PWV2 313 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21719J3KMI9 230 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr877Q8VF62 311 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 CenpvQ9CXS4 252 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Josd1Q9DBJ6 202 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tnfrsf23Q9ER63 176 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ccl28Q9JIL2 130 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 OtogO55225 2910 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fn1P11276 2477 aaKnown RBP5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tenm3Q9WTS6 2715 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ighv5-16A0A0B4J1P4 117 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm5093E9PZB3 174 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm17727E9Q4V7 109 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm20532G3UXR8 106 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21882J3QN86 361 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm4792Q569Q2 183 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Spink2Q8BMY7 86 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Harbi1Q8BR93 349 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr476Q8VGI4 310 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Vmn1r54Q9EPB8 315 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Pkd1l1Q8R526 2615 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 FcgbpE9Q0B5 2583 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ly86O88188 162 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ins2P01326 110 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm9Q3UKW5 162 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Anapc10Q8K2H6 185 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 RpeQ8VEE0 228 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr477Q8VGI6 310 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Immp1lQ9CQU8 166 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr1192-ps1A0A1L1SRD7 309 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Esp23A8R0V5 104 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Hmga2P52927 108 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Hist1h1tQ07133 208 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr904Q7TRC9 310 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Hoxc12Q8K5B8 280 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Defb10Q8R2I8 73 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Stxbp6Q8R3T5 210 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Lmo1Q924W9 156 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Rnf125Q9D9R0 233 aa5.54□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trbv29A0A0G2LB96 114 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gng4P50153 75 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 SeleQ00690 612 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Vwc2lQ505H4 222 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ms4a13Q5FWC3 203 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 C730034F03RikQ8BGL5 111 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Avpi1Q9D7H4 142 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tnfrsf13cQ9D8D0 175 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Slc25a10Q9QZD8 287 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ccpg1osV9GXK1 122 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav8-1A0A075B641 109 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21874J3QNZ6 232 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Edn2P22389 175 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Hint1P70349 126 aaKnown RBP5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21370Q3T9V6 190 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm17334Q8C6U3 126 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Nup35Q8R4R6 325 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Insig2Q91WG1 225 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Rnf126Q91YL2 313 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Zfp119aQ9JIC0 545 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav17A0A075B655 113 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ms4a12A0A087WSB9 263 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm11444F6QMA6 170 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm20873J3QMQ9 232 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 CrxO54751 299 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms