RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Dkk2Q9QYZ8 259 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Tnfrsf9P20334 256 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Lyg1Q9D7Q0 197 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 9130213A22RikQ3V3T2 120 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Iba57Q8CAK1 358 aaKnown RBP9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr1336Q8VGH5 314 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Klk10Q99M20 278 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 8030423J24RikQ9CX45 142 aa9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 ManfQ9CXI5 179 aaKnown RBP9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Rpl11Q9CXW4 178 aaKnown RBP9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Cnn3Q9DAW9 330 aaKnown RBP9.13□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Znf672Q99LH4 468 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 EppinQ9DA01 134 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 BptfA2A654 3036 aaKnown RBP9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr877Q8VF62 311 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr477Q8VGI6 310 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Atxn7l1Q9CZ05 146 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Piezo1E2JF22 2547 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Cd59aO55186 123 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gm10188Q3V432 135 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr1381Q7TQT4 311 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr1380Q7TQT5 311 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Znf146Q8BQN6 292 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 DscamQ9ERC8 2013 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Saa4P31532 130 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Aqp6Q8C4A0 293 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr211Q8VGH2 309 aa9.12□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gosr1O88630 250 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gimap1P70224 277 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gm9944Q8C559 102 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Arl3Q9WUL7 182 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gm6040Q4QY32 63 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Vmn1r197Q8R265 298 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Tmem52Q9D702 196 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Mlst8Q9DCJ1 326 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Mtatp8P03930 67 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 CampP51437 172 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 5730522E02RikQ5SP45 163 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Higd1cQ76I25 96 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Il22ra1Q80XZ4 581 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Vmn1r216Q8R257 298 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Dopey1Q8BL99 2399 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Trav6n-6A0A075B6B2 114 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Zg16Q8K0C5 167 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Immp1lQ9CQU8 166 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Q9CX63 252 aa9.11□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Ighv9-3A0A0B4J1J5 117 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Thy1P01831 162 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 H2-DMb1P35737 261 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 NotoQ5TIS6 240 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Mrpl33Q9CQP0 65 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Dmxl1Q6PNC0 3013 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gm17359A0A0G2JEB7 487 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Nkx3-1P97436 237 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 BtcQ05928 177 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Tnfrsf23Q9ER63 176 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 3110082J24RikF6Z6Z2 108 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Q3UNZ8 350 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Slc17a9Q8VCL5 447 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 HrkP62816 92 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Gm4792Q569Q2 183 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 EpopQ7TNS8 369 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Lyzl1Q9CPX3 148 aa9.1□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Trav7-1A0A0G2JEV5 112 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 NpyP57774 97 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 ArtnQ9Z0L2 224 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 NbasE9Q411 2356 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Ighv1-7A0A075B5T7 117 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Trav6-2Q5R1I4 113 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr761Q7TRJ0 323 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 ChodlQ9CXM0 273 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Tex48Q9DA81 110 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Rs1Q9Z1L4 224 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Trav6-6A0A075B603 114 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 PdpnQ62011 172 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Olfr1373Q7TQT6 311 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Sec11aQ9R0P6 179 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 F930015N05RikQ8C3A3 210 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Ndufb3Q9CQZ6 104 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 Slc25a15Q9WVD5 301 aa9.09□□□□□ -0.95
Topbp1-201ENSMUST00000035164 TracA0A075B662 137 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Cr2P19070 1025 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm10645Q3UPY1 145 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 TectaO08523 2155 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trav14-3A0A075B607 120 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm29289A0A087WPY7 166 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm12057A0A087WR21 115 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm4064A0A087WR82 380 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm10352B2RWR6 380 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm21693J3QK27 380 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rbmy1a1O35698 380 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Crip1P63254 77 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Fancd2osQ9D4K4 178 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Igkv6-23A0A140T8N5 115 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 D930048N14RikA2AA67 225 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Insl3O09107 122 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 TcraP01849 138 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 AvpP35455 168 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Prrx2Q06348 247 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 CklfQ9DAS1 152 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms