RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Igkv4-86A0A0G2JGE7 114 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv6-14A0A140T8P1 115 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 TcraP01849 138 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Defb30Q30KN4 75 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Snx22Q8C084 192 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 AgrnA2ASQ1 1950 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ighv1-81A0A075B5Y4 117 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Olfr1373Q7TQT6 311 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 CntfrO88507 372 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Olfr433Q7TRV9 314 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Parm1Q923D3 296 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Pex7P97865 318 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Tmem241Q3UME2 297 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Vmn1r54Q9EPB8 315 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Efnb3O35393 340 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Q8CF25 301 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ccl21aP84444 133 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ccl21bP86792 133 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ccl21cP86793 133 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ms4a12A0A087WSB9 263 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ear14F6YUX7 155 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Jsrp1Q3MI48 332 aa6.81□□□□□ -1.32
Ssr1-201ENSMUST00000021864 1110002E22RikE0CYV9 1786 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Pglyrp3A1A547 347 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 C330021F23RikQ8C7T0 141 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ighv1-31A0A0A6YWK5 117 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Lcn2P11672 200 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 P01896 185 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Edn1P22387 202 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Usf3B2RUQ2 2221 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 DscamQ9ERC8 2013 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Nat8b-psE0CYC6 232 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Iglc3P01845 104 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv8-34A0A0G2JDU0 121 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm10521E9PZK0 135 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gata2O09100 480 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Mst1P26928 716 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Neurog3P70661 214 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Trav3-1Q5R1I8 114 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Srp19Q9D7A6 144 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Trbv12-1A0A0B4J1H0 124 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 RetnlgQ8K426 117 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 2200002J24RikQ9D807 110 aa6.8□□□□□ -1.32
Ssr1-201ENSMUST00000021864 MpzP27573 248 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm26938S4R185 226 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 P01638 115 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Wbp2nlQ9D529 359 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 TroQ6DIC6 2087 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ighv3-4A0A0A6YXF1 117 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm20458E9PXJ7 78 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 P01724 129 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Znf787Q8BIF9 381 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Dazap2Q9DCP9 168 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv3-9A0A140T8P4 119 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 MsmbO08540 113 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Tmem42Q9CR22 157 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 ArtnQ9Z0L2 224 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm29289A0A087WPY7 166 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm12845A0A0N4SUM5 588 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm10020E9QAZ2 204 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Lynx1P0DP60 116 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 BC048502Q80Y74 154 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Anapc10Q8K2H6 185 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Rpl15Q9CZM2 204 aaKnown RBP6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Edn3P48299 214 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm16381A0A1Y7VKT9 73 aa6.79□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ly86O88188 162 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Spry4Q9WTP2 300 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm20219A0A1B0GRQ3 87 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv4-62A0A0G2JDW9 117 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Supt4h1aP63271 117 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 UngP97931 306 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm4894Q8CA09 118 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Piezo1E2JF22 2547 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Ighv5-6A0A075B5Q0 117 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 1700031F05RikB1AX30 191 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Tmem200bD3Z0P8 284 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 PpyP10601 100 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Rpl23P62830 140 aaKnown RBP6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv4-57-1A0A075B5M4 119 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv14-111A0A140T8P9 117 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Prr19B2RW88 366 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Gm5819E9PZ96 154 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Fblim1Q71FD7 375 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Slamf6Q9ET39 351 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Igkv9-124A0A0G2JDR3 117 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Timp3P39876 211 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Cox6a1P43024 111 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 EtdQ80SW5 59 aa6.78□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Dad1P61804 113 aa6.77□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Hist1h4aP62806 103 aaKnown RBP6.77□□□□□ -1.32
Ssr1-201ENSMUST00000021864 Cited2O35740 269 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Csrp3P50462 194 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm11110Q3U4K9 109 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 MNCb-2875Q9DCB3 74 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm44973A0A140LJJ1 189 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Ly6g6fB2RXM6 300 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Gm20481G3UXK4 153 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Tmem30bQ8BHG3 353 aa6.77□□□□□ -1.33
Ssr1-201ENSMUST00000021864 Lypd1Q8BLC3 141 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms