RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 Igkv6-32A0A140T8N9 115 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Taf15Q8BQ46 557 aaKnown RBP7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Tex36Q9D5N9 219 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Zcchc24B2RVL6 241 aaKnown RBP7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Plscr4P58196 326 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm6040Q4QY32 63 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm11232Q5SPI8 295 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Usmg5Q78IK2 58 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Timp3P39876 211 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Rbm38Q62176 237 aaKnown RBP7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Kiaa0100Q5SYL3 2234 aa7.82□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igkv8-34A0A0G2JDU0 121 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 OdamA1E960 273 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Frmpd3A0A140LIW3 1774 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Trav6-5A0A075B6B5 112 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 P01673 111 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ccl12Q62401 104 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 C330021F23RikQ8C7T0 141 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Lims2Q91XD2 341 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ndufs5Q99LY9 106 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Pip4p2Q9CZX7 257 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ighv8-6A0A0A6YXA3 118 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ube2bP63147 152 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igfbpl1Q80W15 270 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Hist3h2bbQ8CGP0 126 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Hist3h2baQ9D2U9 126 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Lypd8Q9D7S0 255 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igkv14-111A0A140T8P9 117 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm4792Q569Q2 183 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm15294V9GXA7 121 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 PatjQ63ZW7 1834 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 BikO70337 150 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 ApohQ01339 345 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Srsf7Q8BL97 267 aaKnown RBP7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Numa1E9Q7G0 2094 aaKnown RBP7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ifi27l2aQ8R412 90 aa7.81□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Pla2g2aP31482 146 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 LtbP41155 306 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Dynlt3P56387 116 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Tex26Q0VB26 296 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 9930022D16RikQ8BG27 128 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Cxcl13O55038 109 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 P03976 113 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 KncnQ307W7 124 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Znf319Q9ERR8 581 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 NacaP70670 2187 aaKnown RBP7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Baz2aQ91YE5 1889 aaKnown RBP7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igkv12-44A0A140T8M2 115 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 CrygbP04344 175 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 MpzP27573 248 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Espl1P60330 2118 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Mrps36Q9CQX8 102 aa7.8□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Plxnb2B2RXS4 1842 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Mrps21P58059 87 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Defb3Q9WTL0 63 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Siglec15A7E1W8 342 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Amn1B8JKV0 258 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm10251J3QPM5 127 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Tcl1b4P56844 120 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Hist2h2beQ64524 126 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm2916Q9D9B9 127 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igkv12-38A0A0G2JEI7 115 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm21616B6ZB74 166 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 ColqO35348 457 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igll1P20764 209 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Mrpl53Q9D1H8 118 aaKnown RBP7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 H2al1mQ9DAD9 105 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm10203F6QJ09 66 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Cox8bP48772 70 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Slc25a39Q9D8K8 359 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Zfp648D3Z0W3 525 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 P01739 132 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Nbl1Q61477 178 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Pth2Q91W27 100 aa7.79□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Efnb3O35393 340 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 P01822 137 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 PhipQ8VDD9 1821 aaKnown RBP7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ighv7-2A0A0A6YX91 119 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Trip11E9Q512 1976 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Egr2P08152 470 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ccl6P27784 116 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Pou2af1Q64693 256 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 MifP34884 115 aaKnown RBP7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Pax9P47242 342 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Supt4h1aP63271 117 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Tmem256Q5F285 113 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Spred3Q6P6N5 408 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Supt4h1bQ9Z199 117 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Igkv8-26A0A075B5N5 123 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm7257D3YX25 99 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 MscO88940 201 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm16503Q8C6M9 103 aa7.78□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Trav4-4-dv10A0A075B651 110 aa7.77□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Ppp1r32Q148A4 427 aa7.77□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Gm10803Q3TZS6 135 aa7.77□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Klk4Q9Z0M1 255 aa7.77□□□□□ -1.16
Scn4a-201ENSMUST00000021056 Trav9d-4A0A0G2JG37 103 aa7.77□□□□□ -1.17
Scn4a-201ENSMUST00000021056 Rnf217D3YYI7 515 aa7.77□□□□□ -1.17
Scn4a-201ENSMUST00000021056 F930015N05RikQ8C3A3 210 aa7.77□□□□□ -1.17
Scn4a-201ENSMUST00000021056 Ighv14-1A0A075B5R4 117 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 57.3 ms