RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 Q6JHZ5 121 aa4.45□□□□□ -1.7
SCARB2-224ENST00000640880 C5orf56Q8N8D9 126 aa4.45□□□□□ -1.7
SCARB2-224ENST00000640880 FAM104AQ969W3 186 aa4.45□□□□□ -1.7
SCARB2-224ENST00000640880 C16orf95Q9H693 158 aa4.45□□□□□ -1.7
SCARB2-224ENST00000640880 ANK3Q12955 4377 aaKnown RBP4.44□□□□□ -1.7
SCARB2-224ENST00000640880 IGHV3-64A0A075B6Q5 118 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 IGHV3-49A0A0A0MS15 119 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 TLX1NBP0CAT3 122 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 BLCAPP62952 87 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 SERP2Q8N6R1 65 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 DPH3Q96FX2 82 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 USMG5Q96IX5 58 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 CAMK2N2Q96S95 79 aa4.44□□□□□ -1.7
SCARB2-224ENST00000640880 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 TRAV41A0A0B4J266 112 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 LOC107984640A0A0U1RRK4 108 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 FAM19A3Q7Z5A8 133 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 DAZ4Q86SG3 579 aaKnown RBP4.43□□□□□ -1.7
SCARB2-224ENST00000640880 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
SCARB2-224ENST00000640880 DAZ1Q9NQZ3 744 aaKnown RBP4.43□□□□□ -1.7
SCARB2-224ENST00000640880 PSPHP1O15172 72 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 IGHG2P01859 326 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 Q8N2B8 174 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
SCARB2-224ENST00000640880 JMJD1CQ15652 2540 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 hADV29S1A0JD25 119 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 G3V318 75 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 PANO1I0J062 215 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 BCE1O60756 84 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 NDUFC2O95298 119 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
SCARB2-224ENST00000640880 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 ATP5EP2Q5VTU8 51 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 UBE2D4Q9Y2X8 147 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 KLK5Q9Y337 293 aaPredicted RBP4.41□□□□□ -1.7
SCARB2-224ENST00000640880 C22orf24Q9Y442 160 aa4.41□□□□□ -1.7
SCARB2-224ENST00000640880 TRAV12-3A0A0B4J271 114 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 H0YGX0 51 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 DNAL4O96015 105 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 UNQ9165/PRO28630Q6UXU0 137 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 RHPN1-AS1Q9BWJ2 59 aa4.4□□□□□ -1.71
SCARB2-224ENST00000640880 NDUFS5O43920 106 aa4.39□□□□□ -1.71
SCARB2-224ENST00000640880 PRR34Q9NV39 138 aa4.39□□□□□ -1.71
SCARB2-224ENST00000640880 SETD2Q9BYW2 2564 aaPredicted RBP4.39□□□□□ -1.71
SCARB2-224ENST00000640880 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 A0A0U1RQV1 116 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 F5H768 121 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 NPC2P61916 151 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 SNRPD3P62318 126 aaKnown RBP4.38□□□□□ -1.71
SCARB2-224ENST00000640880 CD164Q04900 197 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 CDKN2A-AS1Q9UH64 79 aa4.38□□□□□ -1.71
SCARB2-224ENST00000640880 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
SCARB2-224ENST00000640880 MUC4Q99102 2169 aa4.37□□□□□ -1.71
SCARB2-224ENST00000640880 PSMB8P28062 276 aa4.37□□□□□ -1.71
SCARB2-224ENST00000640880 DEFB1P60022 68 aa4.37□□□□□ -1.71
SCARB2-224ENST00000640880 Q5XG85 94 aa4.37□□□□□ -1.71
SCARB2-224ENST00000640880 ZNF625Q96I27 306 aaPredicted RBP4.37□□□□□ -1.71
SCARB2-224ENST00000640880 LINC00467Q9BRT7 94 aa4.37□□□□□ -1.71
SCARB2-224ENST00000640880 MXRA5Q9NR99 2828 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 A8MTW9 85 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 IGHV3-53P01767 116 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 CRPP02741 224 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 KRTAP10-3P60369 221 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 C10orf99Q6UWK7 81 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 SOSTDC1Q6X4U4 206 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 C4orf3Q8WVX3 66 aa4.36□□□□□ -1.71
SCARB2-224ENST00000640880 CUBNO60494 3623 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 IGHV3-11P01762 117 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 CCKP06307 115 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 SYCNQ0VAF6 134 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 LYPD5Q6UWN5 251 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 SERP1Q9Y6X1 66 aa4.35□□□□□ -1.71
SCARB2-224ENST00000640880 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 ZFHX3Q15911 3703 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 JMJD7-PLA2G4BH0Y9G9 81 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 NTM-AS1Q6ZSK4 140 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
SCARB2-224ENST00000640880 NF1P21359 2839 aa4.34□□□□□ -1.72
SCARB2-224ENST00000640880 ATRQ13535 2644 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
SCARB2-224ENST00000640880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.33□□□□□ -1.72
SCARB2-224ENST00000640880 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms