RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PDE6GP18545 87 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 ITPR3Q14573 2671 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 IGKV3OR2-268A0A0C4DH90 116 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 K7EQD1 137 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 IGHV3-53P01767 116 aa5.52□□□□□ -1.53
VPS11-209ENST00000622309 PRB2P02812 416 aaPredicted RBP5.52□□□□□ -1.53
VPS11-209ENST00000622309 CUBNO60494 3623 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 HIGD2AQ9BW72 106 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 J3QL48 77 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 UBE2L6O14933 153 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 UBE2BP63146 152 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 CDC42SE2Q9NRR3 84 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 APCP25054 2843 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 ABCA2Q9BZC7 2435 aa5.51□□□□□ -1.53
VPS11-209ENST00000622309 LYRM9A8MSI8 78 aa5.5□□□□□ -1.53
VPS11-209ENST00000622309 WNK1Q9H4A3 2382 aa5.5□□□□□ -1.53
VPS11-209ENST00000622309 PDZD2O15018 2839 aa5.5□□□□□ -1.53
VPS11-209ENST00000622309 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
VPS11-209ENST00000622309 HIVEP1P15822 2718 aa5.5□□□□□ -1.53
VPS11-209ENST00000622309 USMG5Q96IX5 58 aa5.49□□□□□ -1.53
VPS11-209ENST00000622309 NF1P21359 2839 aa5.49□□□□□ -1.53
VPS11-209ENST00000622309 C5orf56Q8N8D9 126 aa5.49□□□□□ -1.53
VPS11-209ENST00000622309 X6R8D5 127 aa5.49□□□□□ -1.53
VPS11-209ENST00000622309 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
VPS11-209ENST00000622309 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
VPS11-209ENST00000622309 A0A096LNT2 108 aa5.48□□□□□ -1.53
VPS11-209ENST00000622309 PRM2P04554 102 aa5.48□□□□□ -1.53
VPS11-209ENST00000622309 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
VPS11-209ENST00000622309 PRR3P79522 188 aaKnown RBP5.47□□□□□ -1.53
VPS11-209ENST00000622309 OCR1Q9BZK8 76 aa5.47□□□□□ -1.53
VPS11-209ENST00000622309 SONP18583 2426 aaKnown RBP5.47□□□□□ -1.53
VPS11-209ENST00000622309 SYCNQ0VAF6 134 aa5.47□□□□□ -1.53
VPS11-209ENST00000622309 LINC00575Q6W349 94 aa5.46□□□□□ -1.53
VPS11-209ENST00000622309 Q8N9L7 120 aa5.46□□□□□ -1.53
VPS11-209ENST00000622309 MUC7Q8TAX7 377 aa5.46□□□□□ -1.53
VPS11-209ENST00000622309 LINC00588Q9Y4M8 146 aa5.46□□□□□ -1.53
VPS11-209ENST00000622309 NDUFS5O43920 106 aa5.46□□□□□ -1.54
VPS11-209ENST00000622309 NANOS2P60321 138 aaKnown RBP5.46□□□□□ -1.54
VPS11-209ENST00000622309 LMO4P61968 165 aa5.46□□□□□ -1.54
VPS11-209ENST00000622309 C9orf66Q5T8R8 295 aa5.46□□□□□ -1.54
VPS11-209ENST00000622309 MAPK1IP1LQ8NDC0 245 aa5.46□□□□□ -1.54
VPS11-209ENST00000622309 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
VPS11-209ENST00000622309 UBE2AP49459 152 aa5.45□□□□□ -1.54
VPS11-209ENST00000622309 KRTAP10-9P60411 292 aa5.45□□□□□ -1.54
VPS11-209ENST00000622309 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
VPS11-209ENST00000622309 CCL19Q99731 98 aa5.45□□□□□ -1.54
VPS11-209ENST00000622309 INAFM1C9JVW0 142 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 H3BUX3 64 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 LINC00313P59037 77 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 CCDC168Q8NDH2 2452 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 MTORP42345 2549 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 H3BQ85 93 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 Q6ZQY7 126 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 CELA1Q9UNI1 258 aa5.44□□□□□ -1.54
VPS11-209ENST00000622309 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
VPS11-209ENST00000622309 IGHV4-30-2A0A087WSY4 118 aa5.43□□□□□ -1.54
VPS11-209ENST00000622309 H3BUA1 57 aa5.43□□□□□ -1.54
VPS11-209ENST00000622309 IGHV4-38-2P0DP08 117 aa5.43□□□□□ -1.54
VPS11-209ENST00000622309 LINC01006Q8NI28 216 aa5.43□□□□□ -1.54
VPS11-209ENST00000622309 FAM30AQ9NZY2 134 aa5.42□□□□□ -1.54
VPS11-209ENST00000622309 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
VPS11-209ENST00000622309 IGKV4-1P06312 121 aa5.42□□□□□ -1.54
VPS11-209ENST00000622309 PRR4Q16378 134 aa5.42□□□□□ -1.54
VPS11-209ENST00000622309 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
VPS11-209ENST00000622309 TRBV6-8A0A0A6YYG3 113 aa5.41□□□□□ -1.54
VPS11-209ENST00000622309 A8MTW9 85 aa5.41□□□□□ -1.54
VPS11-209ENST00000622309 PSCAO43653 123 aa5.41□□□□□ -1.54
VPS11-209ENST00000622309 JMJD1CQ15652 2540 aa5.41□□□□□ -1.54
VPS11-209ENST00000622309 TRGV1A0A0A0MS02 117 aa5.41□□□□□ -1.54
VPS11-209ENST00000622309 DEFB131AP59861 70 aa5.4□□□□□ -1.54
VPS11-209ENST00000622309 C16orf90A8MZG2 172 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 HCG22E2RYF7 251 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 Q5VV11 94 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 C10orf99Q6UWK7 81 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 NKAPP1Q8N9T2 125 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 MXRA5Q9NR99 2828 aa5.4□□□□□ -1.55
VPS11-209ENST00000622309 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.55
VPS11-209ENST00000622309 LCA10Q71F78 164 aa5.39□□□□□ -1.55
VPS11-209ENST00000622309 C19orf73Q9NVV2 129 aa5.39□□□□□ -1.55
VPS11-209ENST00000622309 COX7BP24311 80 aa5.38□□□□□ -1.55
VPS11-209ENST00000622309 MP68P56378 58 aa5.38□□□□□ -1.55
VPS11-209ENST00000622309 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
VPS11-209ENST00000622309 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
VPS11-209ENST00000622309 REG3GQ6UW15 175 aa5.38□□□□□ -1.55
VPS11-209ENST00000622309 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
VPS11-209ENST00000622309 DIRC1Q969H9 104 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 A6NED7 52 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 INSP01308 110 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 Q8IZM0 81 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
VPS11-209ENST00000622309 TRGV2A0A075B6R0 118 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 MSMBP08118 114 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 HIGD2BQ4VC39 106 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 NIPBLQ6KC79 2804 aaeCLIP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms