RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
NEK3-207ENST00000617054 XAGE1AQ9HD64 81 aa5.18□□□□□ -1.58
NEK3-207ENST00000617054 KLK5Q9Y337 293 aaPredicted RBP5.18□□□□□ -1.58
NEK3-207ENST00000617054 C15orf56Q8N910 161 aa5.17□□□□□ -1.58
NEK3-207ENST00000617054 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
NEK3-207ENST00000617054 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
NEK3-207ENST00000617054 USP17L23D6RBM5 183 aa5.17□□□□□ -1.58
NEK3-207ENST00000617054 OR13C6PQ8NH95 151 aa5.17□□□□□ -1.58
NEK3-207ENST00000617054 C6orf48Q9UBA6 75 aa5.17□□□□□ -1.58
NEK3-207ENST00000617054 CAMK2N2Q96S95 79 aa5.16□□□□□ -1.58
NEK3-207ENST00000617054 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
NEK3-207ENST00000617054 ETDBQ3ZM63 59 aa5.16□□□□□ -1.58
NEK3-207ENST00000617054 Q6ZRU5 148 aa5.16□□□□□ -1.58
NEK3-207ENST00000617054 NTN5Q8WTR8 489 aaPredicted RBP5.16□□□□□ -1.58
NEK3-207ENST00000617054 UBE2DNLQ8IWF7 75 aa5.15□□□□□ -1.58
NEK3-207ENST00000617054 LINC01561Q8N1V8 128 aa5.15□□□□□ -1.58
NEK3-207ENST00000617054 APLNQ9ULZ1 77 aa5.15□□□□□ -1.58
NEK3-207ENST00000617054 NCR3O14931 201 aa5.15□□□□□ -1.58
NEK3-207ENST00000617054 GAGE2EQ4V326 116 aa5.15□□□□□ -1.59
NEK3-207ENST00000617054 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.59
NEK3-207ENST00000617054 PRO0461Q9UI25 63 aa5.15□□□□□ -1.59
NEK3-207ENST00000617054 TRBV30A0A0K0K1B3 111 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 C9JAW5 83 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 SLPIP03973 132 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 F8WDY8 70 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 CXCL5P42830 114 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 SMIM11BQ8TCY0 68 aa5.14□□□□□ -1.59
NEK3-207ENST00000617054 M0R2N4 97 aa5.13□□□□□ -1.59
NEK3-207ENST00000617054 K7ERU9 68 aa5.13□□□□□ -1.59
NEK3-207ENST00000617054 VPREB1P12018 145 aa5.13□□□□□ -1.59
NEK3-207ENST00000617054 COPS9Q8WXC6 57 aa5.13□□□□□ -1.59
NEK3-207ENST00000617054 FAM218AQ96MZ4 157 aa5.13□□□□□ -1.59
NEK3-207ENST00000617054 F8W1H4 67 aa5.12□□□□□ -1.59
NEK3-207ENST00000617054 COX6CP09669 75 aa5.12□□□□□ -1.59
NEK3-207ENST00000617054 COX17Q14061 63 aa5.12□□□□□ -1.59
NEK3-207ENST00000617054 Q6ZRP5 223 aa5.12□□□□□ -1.59
NEK3-207ENST00000617054 TRBV20-1A0A075B6N2 111 aa5.11□□□□□ -1.59
NEK3-207ENST00000617054 TRAV13-2A0A0B4J235 113 aa5.11□□□□□ -1.59
NEK3-207ENST00000617054 RPL18AQ02543 176 aaKnown RBP5.11□□□□□ -1.59
NEK3-207ENST00000617054 UPK3BQ9BT76 320 aa5.11□□□□□ -1.59
NEK3-207ENST00000617054 VPS13DQ5THJ4 4388 aa5.11□□□□□ -1.59
NEK3-207ENST00000617054 ATXN8Q156A1 80 aa5.11□□□□□ -1.59
NEK3-207ENST00000617054 LINC01620Q4KN68 170 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 LYRM7Q5U5X0 104 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 SLC25A20O43772 301 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 SEC61GP60059 68 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 SYCNQ0VAF6 134 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 A0A087WYN8 130 aa5.1□□□□□ -1.59
NEK3-207ENST00000617054 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.09□□□□□ -1.59
NEK3-207ENST00000617054 GVQW2A0A096LPI5 108 aaPredicted RBP5.09□□□□□ -1.59
NEK3-207ENST00000617054 PSCAO43653 123 aa5.09□□□□□ -1.59
NEK3-207ENST00000617054 FUSP35637 526 aaKnown RBP eCLIP5.09□□□□□ -1.59
NEK3-207ENST00000617054 LST1O00453 97 aa5.09□□□□□ -1.59
NEK3-207ENST00000617054 S100A7L2Q5SY68 101 aa5.09□□□□□ -1.59
NEK3-207ENST00000617054 A0A1B0GV72 72 aa5.08□□□□□ -1.6
NEK3-207ENST00000617054 FAM168BA1KXE4 195 aa5.08□□□□□ -1.6
NEK3-207ENST00000617054 NUPR2A6NF83 97 aa5.08□□□□□ -1.6
NEK3-207ENST00000617054 RPL28P46779 137 aaKnown RBP5.08□□□□□ -1.6
NEK3-207ENST00000617054 ANKRD29Q8N6D5 301 aa5.08□□□□□ -1.6
NEK3-207ENST00000617054 NDUFC2-KCTD14E9PQ53 114 aa5.08□□□□□ -1.6
NEK3-207ENST00000617054 TEX49A0A1B0GTD5 131 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 C9orf129Q5T035 196 aaKnown RBP5.07□□□□□ -1.6
NEK3-207ENST00000617054 CARD19Q96LW7 228 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 HYDINQ4G0P3 5121 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 TRBV10-3A0A0K0K1G6 114 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 C2orf48Q96LS8 159 aa5.07□□□□□ -1.6
NEK3-207ENST00000617054 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
NEK3-207ENST00000617054 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
NEK3-207ENST00000617054 NDUFC2O95298 119 aa5.06□□□□□ -1.6
NEK3-207ENST00000617054 TMEM126AQ9H061 195 aa5.06□□□□□ -1.6
NEK3-207ENST00000617054 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 RMI2Q96E14 147 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 PPDPFQ9H3Y8 114 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 NBDYA0A0U1RRE5 68 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 IGKV2-24A0A0C4DH68 120 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
NEK3-207ENST00000617054 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
NEK3-207ENST00000617054 RPL37AP8A6NKH3 93 aa5.04□□□□□ -1.6
NEK3-207ENST00000617054 TEN1Q86WV5 123 aa5.04□□□□□ -1.6
NEK3-207ENST00000617054 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
NEK3-207ENST00000617054 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
NEK3-207ENST00000617054 LY6G6CO95867 125 aa5.03□□□□□ -1.6
NEK3-207ENST00000617054 FAM19A5Q7Z5A7 132 aaPredicted RBP5.03□□□□□ -1.6
NEK3-207ENST00000617054 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
NEK3-207ENST00000617054 C22orf24Q9Y442 160 aa5.02□□□□□ -1.61
NEK3-207ENST00000617054 DNAL4O96015 105 aa5.02□□□□□ -1.61
NEK3-207ENST00000617054 CHTF8P0CG12 524 aa5.02□□□□□ -1.61
NEK3-207ENST00000617054 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
NEK3-207ENST00000617054 DNAH6Q9C0G6 4158 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 TRAV23DV6A0A075B6W5 121 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 H0YGX0 51 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 A0A096LNI7 61 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 TRACP01848 142 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 NKAPP1Q8N9T2 125 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 SIGMAR1Q99720 223 aa5.01□□□□□ -1.61
NEK3-207ENST00000617054 LRCOL1A6NCL2 159 aa5□□□□□ -1.61
NEK3-207ENST00000617054 MT-ATP8P03928 68 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms