RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
PCDHB16-201ENST00000609684 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
PCDHB16-201ENST00000609684 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
PCDHB16-201ENST00000609684 V9GYY9 64 aa9.79□□□□□ -0.84
PCDHB16-201ENST00000609684 KRTAP24-1Q3LI83 254 aa9.78□□□□□ -0.84
PCDHB16-201ENST00000609684 TRBV7-7A0A0K0K1E9 115 aa9.78□□□□□ -0.84
PCDHB16-201ENST00000609684 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
PCDHB16-201ENST00000609684 Q8NAQ8 132 aa9.77□□□□□ -0.84
PCDHB16-201ENST00000609684 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.85
PCDHB16-201ENST00000609684 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
PCDHB16-201ENST00000609684 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
PCDHB16-201ENST00000609684 H3BNG1 76 aa9.77□□□□□ -0.85
PCDHB16-201ENST00000609684 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
PCDHB16-201ENST00000609684 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
PCDHB16-201ENST00000609684 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
PCDHB16-201ENST00000609684 KIAA0087Q14695 138 aa9.75□□□□□ -0.85
PCDHB16-201ENST00000609684 LINC00167Q96N53 147 aa9.75□□□□□ -0.85
PCDHB16-201ENST00000609684 SPATA3Q8NHX4 192 aa9.74□□□□□ -0.85
PCDHB16-201ENST00000609684 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
PCDHB16-201ENST00000609684 LITAFQ99732 161 aa9.74□□□□□ -0.85
PCDHB16-201ENST00000609684 NHLRC4P0CG21 123 aaPredicted RBP9.73□□□□□ -0.85
PCDHB16-201ENST00000609684 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
PCDHB16-201ENST00000609684 A0A096LNT2 108 aa9.72□□□□□ -0.85
PCDHB16-201ENST00000609684 MDFIQ99750 246 aa9.72□□□□□ -0.85
PCDHB16-201ENST00000609684 TMEM254Q8TBM7 123 aa9.72□□□□□ -0.85
PCDHB16-201ENST00000609684 A6NED7 52 aa9.71□□□□□ -0.85
PCDHB16-201ENST00000609684 CXCL6P80162 114 aa9.71□□□□□ -0.85
PCDHB16-201ENST00000609684 PRR15LQ9BU68 103 aa9.71□□□□□ -0.85
PCDHB16-201ENST00000609684 USP24Q9UPU5 2620 aa9.71□□□□□ -0.86
PCDHB16-201ENST00000609684 ELOF1P60002 83 aaKnown RBP9.7□□□□□ -0.86
PCDHB16-201ENST00000609684 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
PCDHB16-201ENST00000609684 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
PCDHB16-201ENST00000609684 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
PCDHB16-201ENST00000609684 H0Y9P7 68 aa9.67□□□□□ -0.86
PCDHB16-201ENST00000609684 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
PCDHB16-201ENST00000609684 LINC00588Q9Y4M8 146 aa9.66□□□□□ -0.86
PCDHB16-201ENST00000609684 BPTFQ12830 3046 aa9.66□□□□□ -0.86
PCDHB16-201ENST00000609684 MGAM2Q2M2H8 2515 aa9.64□□□□□ -0.87
PCDHB16-201ENST00000609684 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
PCDHB16-201ENST00000609684 LAMA3Q16787 3333 aa9.64□□□□□ -0.87
PCDHB16-201ENST00000609684 Q6ZQT0 140 aa9.63□□□□□ -0.87
PCDHB16-201ENST00000609684 Q6ZRX8 168 aa9.63□□□□□ -0.87
PCDHB16-201ENST00000609684 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
PCDHB16-201ENST00000609684 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
PCDHB16-201ENST00000609684 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
PCDHB16-201ENST00000609684 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
PCDHB16-201ENST00000609684 K7ERS5 55 aa9.62□□□□□ -0.87
PCDHB16-201ENST00000609684 GIG44P09565 113 aaPredicted RBP9.61□□□□□ -0.87
PCDHB16-201ENST00000609684 PHF5AQ7RTV0 110 aaKnown RBP9.61□□□□□ -0.87
PCDHB16-201ENST00000609684 Q6ZRP5 223 aa9.6□□□□□ -0.87
PCDHB16-201ENST00000609684 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
PCDHB16-201ENST00000609684 FLNAP21333 2647 aaKnown RBP9.6□□□□□ -0.87
PCDHB16-201ENST00000609684 LOC110117498A0A087WWA1 95 aa9.59□□□□□ -0.87
PCDHB16-201ENST00000609684 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
PCDHB16-201ENST00000609684 CENPEQ02224 2701 aa9.59□□□□□ -0.87
PCDHB16-201ENST00000609684 VPREB1P12018 145 aa9.58□□□□□ -0.88
PCDHB16-201ENST00000609684 Q8NBF4 154 aa9.58□□□□□ -0.88
PCDHB16-201ENST00000609684 MOBPQ13875 183 aa9.58□□□□□ -0.88
PCDHB16-201ENST00000609684 DNAH10OSP0CZ25 163 aa9.57□□□□□ -0.88
PCDHB16-201ENST00000609684 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
PCDHB16-201ENST00000609684 NBDYA0A0U1RRE5 68 aa9.57□□□□□ -0.88
PCDHB16-201ENST00000609684 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
PCDHB16-201ENST00000609684 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
PCDHB16-201ENST00000609684 CRYGAP11844 174 aa9.56□□□□□ -0.88
PCDHB16-201ENST00000609684 TRANK1O15050 2925 aa9.56□□□□□ -0.88
PCDHB16-201ENST00000609684 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
PCDHB16-201ENST00000609684 KRTAP10-3P60369 221 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 BRCA2P51587 3418 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 hDV103S1A0JD37 113 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 PSPHP1O15172 72 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 A0A1B0GW54 56 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 CHTF8P0CG12 524 aa9.55□□□□□ -0.88
PCDHB16-201ENST00000609684 LIMD2Q9BT23 127 aa9.53□□□□□ -0.88
PCDHB16-201ENST00000609684 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
PCDHB16-201ENST00000609684 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
PCDHB16-201ENST00000609684 A0A0C4DFX4 3053 aa9.53□□□□□ -0.88
PCDHB16-201ENST00000609684 KRTAP10-11P60412 298 aa9.53□□□□□ -0.88
PCDHB16-201ENST00000609684 BCE1O60756 84 aa9.52□□□□□ -0.89
PCDHB16-201ENST00000609684 RTL8CO15255 209 aa9.51□□□□□ -0.89
PCDHB16-201ENST00000609684 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
PCDHB16-201ENST00000609684 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
PCDHB16-201ENST00000609684 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
PCDHB16-201ENST00000609684 CFAP54Q96N23 3096 aa9.51□□□□□ -0.89
PCDHB16-201ENST00000609684 LINC00612Q8N6U2 182 aa9.5□□□□□ -0.89
PCDHB16-201ENST00000609684 SPINK1P00995 79 aa9.5□□□□□ -0.89
PCDHB16-201ENST00000609684 C1orf195Q5TG92 126 aa9.49□□□□□ -0.89
PCDHB16-201ENST00000609684 LAMA2P24043 3122 aaKnown RBP9.49□□□□□ -0.89
PCDHB16-201ENST00000609684 SPACA4Q8TDM5 124 aa9.48□□□□□ -0.89
PCDHB16-201ENST00000609684 ATRQ13535 2644 aa9.48□□□□□ -0.89
PCDHB16-201ENST00000609684 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
PCDHB16-201ENST00000609684 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.89
PCDHB16-201ENST00000609684 K7EIL1 84 aa9.46□□□□□ -0.89
PCDHB16-201ENST00000609684 IGKV2D-30A0A075B6S6 120 aa9.46□□□□□ -0.89
PCDHB16-201ENST00000609684 IGKV2-30P06310 120 aa9.46□□□□□ -0.89
PCDHB16-201ENST00000609684 MGAQ8IWI9 3026 aa9.46□□□□□ -0.89
PCDHB16-201ENST00000609684 C15orf56Q8N910 161 aa9.46□□□□□ -0.9
PCDHB16-201ENST00000609684 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.9
PCDHB16-201ENST00000609684 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 MAST4O15021 2626 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms