RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 A0A0J9YXY3 114 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 TMEM170BQ5T4T1 132 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 PPDPFQ9H3Y8 114 aa5.14□□□□□ -1.59
SMAD4-209ENST00000589941 TRAV12-3A0A0B4J271 114 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 TINCRA0A1B0GVN0 87 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 F5H768 121 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 SLC25A20O43772 301 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 PRM2P04554 102 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 MRPL23Q16540 153 aaKnown RBP5.13□□□□□ -1.59
SMAD4-209ENST00000589941 LINC01620Q4KN68 170 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 UPK3BQ9BT76 320 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 SPANXA1Q9NS26 97 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 ERG28Q9UKR5 140 aa5.13□□□□□ -1.59
SMAD4-209ENST00000589941 IGHV1-58A0A0C4DH39 117 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 A0A0J9YXV3 536 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 TRBV10-2A0A0K0K1G8 114 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 H3BT86 120 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 IGHV3-30-3P0DP02 117 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 SNRPD3P62318 126 aaKnown RBP5.12□□□□□ -1.59
SMAD4-209ENST00000589941 ATXN8Q156A1 80 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 ESRGQ1W209 222 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 TIMM21Q9BVV7 248 aa5.12□□□□□ -1.59
SMAD4-209ENST00000589941 GEMIN7Q9H840 131 aaKnown RBP5.12□□□□□ -1.59
SMAD4-209ENST00000589941 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 SCGB1C2P0DMR2 95 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 DEFB130BP0DP73 79 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 DEFB130AP0DP74 79 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 IFITM1P13164 125 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 ZNF56Q15929 161 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 MIAQ16674 131 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 Q6ZSA8 131 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 CHCHD7Q9BUK0 85 aa5.11□□□□□ -1.59
SMAD4-209ENST00000589941 TRAV26-1A0A087WT03 109 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 SMIM9A6NGZ8 99 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 C9JAW5 83 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 H3BMM0 161 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 C1orf158Q8N1D5 194 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 VSIG2Q96IQ7 327 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 DNAJC30Q96LL9 226 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 OPRPNQ99935 248 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-209ENST00000589941 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
SMAD4-209ENST00000589941 FAM74A4Q5TZK3 123 aa5.09□□□□□ -1.59
SMAD4-209ENST00000589941 UBE2D4Q9Y2X8 147 aa5.09□□□□□ -1.59
SMAD4-209ENST00000589941 ICOSQ9Y6W8 199 aa5.09□□□□□ -1.59
SMAD4-209ENST00000589941 TRAV12-2A0A075B6T6 113 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 PLAC8L1A1L4L8 177 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 LST1O00453 97 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 NDUFA1O15239 70 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 RS1O15537 224 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 IGHV3-53P01767 116 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 SPINK13Q1W4C9 94 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 C11orf72Q8NBR9 251 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
SMAD4-209ENST00000589941 SMIM1B2RUZ4 78 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 H7C423 109 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 ZNF415Q09FC8 603 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 ADAMTSL4-AS1Q5T5F5 129 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 GAGE2AQ6NT46 116 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 UBE2WQ96B02 151 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
SMAD4-209ENST00000589941 CSDC2Q9Y534 153 aaKnown RBP5.07□□□□□ -1.6
SMAD4-209ENST00000589941 LRCOL1A6NCL2 159 aa5.06□□□□□ -1.6
SMAD4-209ENST00000589941 ATP5G1P05496 136 aa5.06□□□□□ -1.6
SMAD4-209ENST00000589941 SDIM1Q6ZPB5 146 aa5.06□□□□□ -1.6
SMAD4-209ENST00000589941 TRAV8-3A0A0A6YYJ7 113 aa5.05□□□□□ -1.6
SMAD4-209ENST00000589941 TRAV8-4A0A0B4J246 113 aa5.05□□□□□ -1.6
SMAD4-209ENST00000589941 TRBV7-7A0A0K0K1E9 115 aa5.05□□□□□ -1.6
SMAD4-209ENST00000589941 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
SMAD4-209ENST00000589941 COX6CP09669 75 aa5.05□□□□□ -1.6
SMAD4-209ENST00000589941 NDUFV3P56181 108 aaKnown RBP5.05□□□□□ -1.6
SMAD4-209ENST00000589941 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-209ENST00000589941 TRAV4A0A0B4J268 109 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 SNCGO76070 127 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 TMEM101Q96IK0 257 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
SMAD4-209ENST00000589941 IGHV3-64A0A075B6Q5 118 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 TEX49A0A1B0GTD5 131 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 ACYP1P07311 99 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 HERVK_113P63121 156 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 Q1RN00 199 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 Q8N814 137 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-209ENST00000589941 IMUPQ9GZP8 106 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 CDKN2A-AS1Q9UH64 79 aa5.03□□□□□ -1.6
SMAD4-209ENST00000589941 COX7A2LO14548 114 aa5.02□□□□□ -1.61
SMAD4-209ENST00000589941 TRACP01848 142 aa5.02□□□□□ -1.61
SMAD4-209ENST00000589941 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms