RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
TTC39C-207ENST00000581394 H3BQF6 201 aa-0.28□□□□□ -2.45
TTC39C-207ENST00000581394 SPTBN4Q9H254 2564 aa-0.28□□□□□ -2.45
TTC39C-207ENST00000581394 TARBP1Q13395 1621 aaKnown RBP-0.28□□□□□ -2.45
TTC39C-207ENST00000581394 DCHS2Q6V1P9 2916 aa-0.28□□□□□ -2.45
TTC39C-207ENST00000581394 NBEAL2Q6ZNJ1 2754 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 TENM2Q9NT68 2774 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 UQCRHP07919 91 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 LINC00032P0C843 101 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 SPRR2BP35325 72 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 USMG5Q96IX5 58 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 VAMP8Q9BV40 100 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 HIGD1BQ9P298 99 aa-0.29□□□□□ -2.46
TTC39C-207ENST00000581394 KNDC1Q76NI1 1749 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 COL6A3P12111 3177 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 PDCD11Q14690 1871 aaKnown RBP-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 APLNQ9ULZ1 77 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 AP4S1Q9Y587 144 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 FMN2Q9NZ56 1722 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 BIRC6Q9NR09 4857 aa-0.3□□□□□ -2.46
TTC39C-207ENST00000581394 SAMD9Q5K651 1589 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 LAMA5O15230 3695 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 CPSF4LA6NMK7 179 aaKnown RBP-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 F8WEM9 126 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 COX8AP10176 69 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 FAUP35544 74 aaKnown RBP-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 KRTAP20-2Q3LI61 65 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 COL5A1-AS1Q5SY13 56 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 LELP1Q5T871 98 aa-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 SRRM2Q9UQ35 2752 aaKnown RBP-0.31□□□□□ -2.46
TTC39C-207ENST00000581394 ACANP16112 2415 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 COL12A1Q99715 3063 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 SHPRHQ149N8 1683 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 SPINK4O60575 86 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 S100A8P05109 93 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 PKIAP61925 76 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 GNGT1P63211 74 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 H1FX-AS1Q4G0G2 97 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 C20orf78Q9BR46 151 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 FXYD6Q9H0Q3 95 aa-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.32□□□□□ -2.46
TTC39C-207ENST00000581394 IGLC2P0DOY2 106 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 IGLC3P0DOY3 106 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 HMGN3Q15651 99 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 ETDBQ3ZM63 59 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 SONP18583 2426 aaKnown RBP-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 EPRSP07814 1512 aaKnown RBP-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 CUX1P39880 1505 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 ABCC2Q92887 1545 aa-0.33□□□□□ -2.46
TTC39C-207ENST00000581394 STAB2Q8WWQ8 2551 aa-0.34□□□□□ -2.46
TTC39C-207ENST00000581394 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.34□□□□□ -2.46
TTC39C-207ENST00000581394 TROQ12816 1431 aaPredicted RBP-0.34□□□□□ -2.46
TTC39C-207ENST00000581394 CCNB3Q8WWL7 1395 aa-0.34□□□□□ -2.46
TTC39C-207ENST00000581394 TEP1Q99973 2627 aaKnown RBP-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 UQCRHLA0A096LP55 91 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 M0R2T5 61 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 MT4P47944 62 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 KRTAP20-1Q3LI63 56 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 MRPL34Q9BQ48 92 aaKnown RBP-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 UBE2D4Q9Y2X8 147 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 FANCAO15360 1455 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 ANKRD26Q9UPS8 1709 aa-0.35□□□□□ -2.47
TTC39C-207ENST00000581394 FLNBO75369 2602 aaKnown RBP-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 D6R8Y8 96 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 DEFB112Q30KQ8 113 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 MUSTN1Q8IVN3 82 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 LRRC37AA6NMS7 1700 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 IQSEC2Q5JU85 1478 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 REV3LO60673 3130 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 COL6A5A8TX70 2615 aa-0.36□□□□□ -2.47
TTC39C-207ENST00000581394 DOPEY1Q5JWR5 2465 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 LOC730098B7Z3J9 87 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 I3L3M4 83 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 LEPROTL1O95214 131 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 ALKAL2Q6UX46 152 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 ZNF720Q7Z2F6 126 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 ATP10BO94823 1461 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 CCDC141Q6ZP82 1450 aa-0.37□□□□□ -2.47
TTC39C-207ENST00000581394 LAMA2P24043 3122 aaKnown RBP-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 CNOT1A5YKK6 2376 aaKnown RBP-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 CEP162Q5TB80 1403 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 NEXMIFQ5QGS0 1516 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 KIAA1551Q9HCM1 1747 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 MAGI2Q86UL8 1455 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 C5P01031 1676 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 TGP01266 2768 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 PKD1P98161 4303 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 PDZD2O15018 2839 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 PCNX1Q96RV3 2341 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 MON2Q7Z3U7 1717 aa-0.38□□□□□ -2.47
TTC39C-207ENST00000581394 GYPAP02724 150 aa-0.39□□□□□ -2.47
TTC39C-207ENST00000581394 HMGN2P05204 90 aaKnown RBP-0.39□□□□□ -2.47
TTC39C-207ENST00000581394 CELSR3Q9NYQ7 3312 aa-0.39□□□□□ -2.47
TTC39C-207ENST00000581394 SVEP1Q4LDE5 3571 aa-0.4□□□□□ -2.47
TTC39C-207ENST00000581394 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
TTC39C-207ENST00000581394 KRTAP6-2Q3LI66 62 aa-0.4□□□□□ -2.47
TTC39C-207ENST00000581394 NMSQ5H8A3 153 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms