RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CACNA1HO95180 2353 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 KIF21AQ7Z4S6 1674 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 PDCD11Q14690 1871 aaKnown RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 TNRC18O15417 2968 aaPredicted RBP0.2□□□□□ -2.38
CHD9-211ENST00000564600 UACAQ9BZF9 1416 aa0.2□□□□□ -2.38
CHD9-211ENST00000564600 BICRAQ9NZM4 1560 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 SIPA1L3O60292 1781 aaPredicted RBP0.19□□□□□ -2.38
CHD9-211ENST00000564600 EHBP1L1Q8N3D4 1523 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 TLN2Q9Y4G6 2542 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 CFAP46Q8IYW2 2715 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 SPTAN1Q13813 2472 aaKnown RBP0.19□□□□□ -2.38
CHD9-211ENST00000564600 ATP10BO94823 1461 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 A0A087WVE0 104 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 UMAD1C9J7I0 102 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 H7BZZ5 65 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 MT-ATP8P03928 68 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 IGLC2P0DOY2 106 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 COX7BP24311 80 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 ATP5EP2Q5VTU8 51 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 C9orf62Q8N4C0 152 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 ST20Q9HBF5 79 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 CEP250Q9BV73 2442 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 MED13LQ71F56 2210 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 PLXNB2O15031 1838 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 TENM2Q9NT68 2774 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 CNOT1A5YKK6 2376 aaKnown RBP0.19□□□□□ -2.38
CHD9-211ENST00000564600 EDC4Q6P2E9 1401 aaKnown RBP0.19□□□□□ -2.38
CHD9-211ENST00000564600 MTORP42345 2549 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 MUC22E2RYF6 1773 aaPredicted RBP0.19□□□□□ -2.38
CHD9-211ENST00000564600 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 NIPBLQ6KC79 2804 aaeCLIP0.19□□□□□ -2.38
CHD9-211ENST00000564600 PKD1L1Q8TDX9 2849 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 MXRA5Q9NR99 2828 aa0.19□□□□□ -2.38
CHD9-211ENST00000564600 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 PRDM2Q13029 1718 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 KALRNO60229 2985 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 CUX1P39880 1505 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 PRDM15P57071 1507 aaPredicted RBP0.18□□□□□ -2.38
CHD9-211ENST00000564600 HMGXB3Q12766 1538 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 ASXL3Q9C0F0 2248 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
CHD9-211ENST00000564600 CENPEQ02224 2701 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 FANCAO15360 1455 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 C1orf167Q5SNV9 1468 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 NBEAL1Q6ZS30 2694 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.18□□□□□ -2.38
CHD9-211ENST00000564600 APCP25054 2843 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 LRP6O75581 1613 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 LINC00959A0A1B0GUT2 108 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 I3L2K1 104 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 K7EP34 96 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 M0R2T5 61 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 SMIM13P0DJ93 91 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 MRPL34Q9BQ48 92 aaKnown RBP0.18□□□□□ -2.38
CHD9-211ENST00000564600 SNHG12Q9BXW3 62 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 PRO3102Q9H379 93 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 ABCA1O95477 2261 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 TGP01266 2768 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 SSC5DA1L4H1 1573 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 DIP2CQ9Y2E4 1556 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 F5P12259 2224 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 DSPP15924 2871 aaKnown RBP0.18□□□□□ -2.38
CHD9-211ENST00000564600 NBASA2RRP1 2371 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 FAM186AA6NE01 2351 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 ZFYVE16Q7Z3T8 1539 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 KDM5AP29375 1690 aaKnown RBP0.18□□□□□ -2.38
CHD9-211ENST00000564600 MYOM1P52179 1685 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 QRICH2Q9H0J4 1663 aa0.18□□□□□ -2.38
CHD9-211ENST00000564600 KIF20BQ96Q89 1820 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 OTOGQ6ZRI0 2925 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 ADGRL2O95490 1459 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 LRRC9Q6ZRR7 1453 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 BIVM-ERCC5R4GMW8 1640 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 CELSR3Q9NYQ7 3312 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
CHD9-211ENST00000564600 LRRC37AA6NMS7 1700 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 APC2O95996 2303 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 SERF2P84101 59 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 ACACAQ13085 2346 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 DEFB135Q30KP9 77 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 H1FX-AS1Q4G0G2 97 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 TEX15Q9BXT5 2789 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 UBL5Q9BZL1 73 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 PIEZO2Q9H5I5 2752 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 PLCE1Q9P212 2302 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 MUC12Q9UKN1 5478 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 WDR87Q6ZQQ6 2873 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 FOCADQ5VW36 1801 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 CFAP47Q6ZTR5 3102 aa0.17□□□□□ -2.38
CHD9-211ENST00000564600 SPTBN1Q01082 2364 aaKnown RBP0.17□□□□□ -2.38
CHD9-211ENST00000564600 PTPRQQ9UMZ3 2332 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 PLEKHH2Q8IVE3 1493 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 ITPR2Q14571 2701 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 ZZEF1O43149 2961 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 PHLPP1O60346 1717 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms