RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 TRAV8-4A0A0B4J246 113 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 IGLL5B9A064 214 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 IFITM1P13164 125 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
CAPN3-210ENST00000561817 UPK3BQ9BT76 320 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 KLK5Q9Y337 293 aaPredicted RBP4.36□□□□□ -1.71
CAPN3-210ENST00000561817 LYSTQ99698 3801 aa4.36□□□□□ -1.71
CAPN3-210ENST00000561817 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 A0A0B4J2C4 111 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 H3BUT2 72 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 DAND5Q8N907 189 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 LINC00308Q8TCZ7 52 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 RAB37Q96AX2 223 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 UBE2WQ96B02 151 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
CAPN3-210ENST00000561817 TOMM7Q9P0U1 55 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 APLNQ9ULZ1 77 aa4.35□□□□□ -1.71
CAPN3-210ENST00000561817 IBA57-AS1B1ANH7 110 aa4.34□□□□□ -1.71
CAPN3-210ENST00000561817 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
CAPN3-210ENST00000561817 SFTA2Q6UW10 78 aa4.34□□□□□ -1.71
CAPN3-210ENST00000561817 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
CAPN3-210ENST00000561817 LOC107984156A0A0G2JMH3 177 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 NUPR2A6NF83 97 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 APOMO95445 188 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 PRSS2P07478 247 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
CAPN3-210ENST00000561817 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 ARL17AQ8IVW1 177 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 ERG28Q9UKR5 140 aa4.33□□□□□ -1.72
CAPN3-210ENST00000561817 GVQW2A0A096LPI5 108 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-210ENST00000561817 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-210ENST00000561817 C3orf84H3BNL1 204 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 K7EP34 96 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 CDK2AP2O75956 126 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 CRPP02741 224 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 CXCL5P42830 114 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 CCL18P55774 89 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 NPC2P61916 151 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 SPAG11BQ08648 103 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
CAPN3-210ENST00000561817 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-210ENST00000561817 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 OR13C6PQ8NH95 151 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
CAPN3-210ENST00000561817 FABP2P12104 132 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 LINC00158P58513 81 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 COX17Q14061 63 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
CAPN3-210ENST00000561817 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 SPCS1Q9Y6A9 102 aa4.3□□□□□ -1.72
CAPN3-210ENST00000561817 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 ALMS1Q8TCU4 4167 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 IGKV2D-24A0A075B6R9 120 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 TRBV30A0A0K0K1B3 111 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 LY6G6CO95867 125 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 PFN2P35080 140 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 CKS1BP61024 79 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 Q8NDZ9 215 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 VPS25Q9BRG1 176 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 SS18L2Q9UHA2 77 aa4.29□□□□□ -1.72
CAPN3-210ENST00000561817 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
CAPN3-210ENST00000561817 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
CAPN3-210ENST00000561817 LINC00337Q8N6G1 96 aa4.28□□□□□ -1.72
CAPN3-210ENST00000561817 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
CAPN3-210ENST00000561817 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
CAPN3-210ENST00000561817 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
CAPN3-210ENST00000561817 TCL1BO95988 128 aa4.27□□□□□ -1.73
CAPN3-210ENST00000561817 Q6ZRU5 148 aa4.27□□□□□ -1.73
CAPN3-210ENST00000561817 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
CAPN3-210ENST00000561817 H7C2G1 150 aa4.26□□□□□ -1.73
CAPN3-210ENST00000561817 NDUFC2O95298 119 aa4.26□□□□□ -1.73
CAPN3-210ENST00000561817 WFDC2Q14508 124 aa4.26□□□□□ -1.73
CAPN3-210ENST00000561817 TRBV20-1A0A075B6N2 111 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 H3BMG7 143 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
CAPN3-210ENST00000561817 Q6ZRN7 208 aaPredicted RBP4.25□□□□□ -1.73
CAPN3-210ENST00000561817 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 RMI2Q96E14 147 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 LINC01600Q96MT4 127 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms